RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA917598" and tax_phylum = "Hofneiviricota"

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tax_superkingdom 1

tax_phylum 1

  • Hofneiviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA917598 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27561516 27561516 PRJNA917598_P_NODE_53944_length_311_cov_0.970588_g53000_i0 PRJNA917598 53944 311 0.970588 3.01852868 Inoviridae sp. 2219103 Viruses Viruses 118 4.77e-29   NR XOE96177.1 2219103 g53000 i0 54.4 0.993569131832797 103 47 99.4 0 1 309 138 240 XOE96177.1 MAG: hypothetical protein [Inoviridae sp.] diamond 309 118 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
30656500 30656500 PRJNA917598_P_NODE_49493_length_326_cov_1.217391_g48549_i0 PRJNA917598 49493 326 1.217391 3.96869466 Inoviridae sp. 2219103 Viruses Viruses 108 4.61e-28   NR XOF06261.1 2219103 g48549 i0 50.5 0.911042944785276 99 49 91.1 0 23 319 1 99 XOF06261.1 MAG: hypothetical protein [Inoviridae sp.] diamond 297 108 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;