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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA917598" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA917598 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3447452 3447452 PRJNA917598_P_NODE_64943_length_282_cov_1.220096_g63999_i0 PRJNA917598 64943 282 1.220096 3.44067072 Thecamoeba quadrilineata 343530 Discosea other_Eukaryota 130 3.72e-35   NR YP_010576297.1 343530 g63999 i0 70 0.957446808510638 90 25 93.6 1 18 281 102 191 YP_010576297.1 hypothetical protein OYV93_mgp28 [Thecamoeba quadrilineata] diamond 270 130 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba quadrilineata
25122384 25122384 PRJNA917598_P_NODE_54020_length_310_cov_2.907173_g53076_i0 PRJNA917598 54020 310 2.907173 9.0122363 Thecamoeba quadrilineata 343530 Discosea other_Eukaryota 154 2.23e-43   NR YP_010576281.1 343530 g53076 i0 70.2 1.00645161290323 104 30 99.7 1 310 2 156 259 YP_010576281.1 ribosomal protein L2 [Thecamoeba quadrilineata] diamond 312 154 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba quadrilineata
27663925 27663925 PRJNA917598_P_NODE_73444_length_265_cov_0.848958_g72500_i0 PRJNA917598 73444 265 0.848958 2.2497387 root 1 Root_unresolved Root_unresolved 119 4.94e-31   NR XP_004367664.1 1257118 g72500 i0 59.8 2.94339622641509 87 35 98.5 0 263 3 169 255 XP_004367664.1 phytanoylCoA dioxygenase [Acanthamoeba castellanii str. Neff] diamond 780 119 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28098473 28098473 PRJNA917598_P_NODE_88625_length_245_cov_1.790698_g87681_i0 PRJNA917598 88625 245 1.790698 4.3872101 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 124 8.84e-31   NR XP_004348506.1 1257118 g87681 i0 70.4 2.00816326530612 81 24 99.2 0 2 244 306 386 XP_004348506.1 cleavage and polyadenylation specific factor 3like, putative [Acanthamoeba castellanii str. Neff] diamond 492 124 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30877717 30877717 PRJNA917598_P_NODE_94034_length_242_cov_0.911243_g93090_i0 PRJNA917598 94034 242 0.911243 2.20520806 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 116 3.76e-28   NR XP_004340273.1 1257118 g93090 i0 69.2 0.966942148760331 78 24 96.7 0 237 4 186 263 XP_004340273.1 telomeraseassociated protein 1, putative [Acanthamoeba castellanii str. Neff] diamond 234 116 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31137493 31137493 PRJNA917598_P_NODE_70835_length_270_cov_1.532995_g69891_i0 PRJNA917598 70835 270 1.532995 4.1390865 root 1 Root_unresolved Root_unresolved 51.2 5.19e-5   NR XP_004333230.1 1257118 g69891 i0 40 2.7 90 47 95.6 2 13 270 258 344 XP_004333230.1 RNA ligase [Acanthamoeba castellanii str. Neff] diamond 729 51.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31478541 31478541 PRJNA917598_P_NODE_81876_length_250_cov_0.870056_g80932_i0 PRJNA917598 81876 250 0.870056 2.17514 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 95.1 1.55e-20   NR XP_004341725.1 1257118 g80932 i0 71.7 1.452 60 17 72 0 183 4 5 64 XP_004341725.1 RecF/RecN/SMC domain containing protein [Acanthamoeba castellanii str. Neff] diamond 363 95.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31478554 31478554 PRJNA917598_P_NODE_94596_length_242_cov_0.911243_g93652_i0 PRJNA917598 94596 242 0.911243 2.20520806 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 89 1.94e-19   NR XP_004340229.1 1257118 g93652 i0 65.4 0.966942148760331 78 24 96.7 2 6 239 49 123 XP_004340229.1 ribosomal protein L6e, putative [Acanthamoeba castellanii str. Neff] diamond 234 89 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;