contig_metadata
11 rows where analysis = "diamond", bioproject = "PRJNA917598" and tax_phylum = "Cyanobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27720124 | 27720124 | PRJNA917598_P_NODE_82164_length_250_cov_0.870056_g81220_i0 | PRJNA917598 | 82164 | 250 | 0.870056 | 2.17514 | Oculatellaceae cyanobacterium | 3088181 | Bacteria | Bacteria | 114 | 3.61e-27 | NR | HEY9760341.1 | 3088181 | g81220 | i0 | 69.7 | 0.912 | 76 | 22 | 90 | 1 | 226 | 2 | 1 | 76 | HEY9760341.1 response regulator [Oculatellaceae cyanobacterium] | diamond | 228 | 114 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oculatellales | Oculatellaceae | Oculatellaceae cyanobacterium | ||
| 28066905 | 28066905 | PRJNA917598_P_NODE_52665_length_315_cov_1.272727_g51721_i0 | PRJNA917598 | 52665 | 315 | 1.272727 | 4.00909005 | Arthrospira platensis Ap-s | 118562 | Bacteria | Bacteria | 202 | 3.98e-63 | NR | ABC46995.1 | 357682 | g51721 | i0 | 98.1 | 0.990476190476191 | 104 | 2 | 99 | 0 | 3 | 314 | 70 | 173 | ABC46995.1 chemotaxis signal transduction protein, partial [Arthrospira platensis Ap-s] | diamond | 312 | 202 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Sirenicapillariaceae | Limnospira | Limnospira platensis | |
| 29235230 | 29235230 | PRJNA917598_P_NODE_14789_length_613_cov_1.527778_g13855_i0 | PRJNA917598 | 14789 | 613 | 1.527778 | 9.36527914 | Anabaena sp. WA113 | 1710889 | Bacteria | Bacteria | 104 | 3.11e-25 | NR | OBQ15776.1 | 1710889 | g13855 | i0 | 57.1 | 0.411092985318108 | 84 | 36 | 41.1 | 0 | 353 | 102 | 10 | 93 | OBQ15776.1 MAG: hypothetical protein AN488_20530 [Anabaena sp. WA113] | diamond | 252 | 104 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Anabaena | Anabaena sp. WA113 | |
| 29961414 | 29961414 | PRJNA917598_P_NODE_42691_length_351_cov_2.582734_g41747_i0 | PRJNA917598 | 42691 | 351 | 2.582734 | 9.06539634 | Trichormus sp. M33_DOE_039 | 2747804 | Bacteria | Bacteria | 118 | 2.1000000000000002e-30 | NR | HIK06411.1 | 2747804 | g41747 | i0 | 63.3 | 3.97435897435897 | 90 | 31 | 75.2 | 1 | 3 | 266 | 144 | 233 | HIK06411.1 CHRD domain-containing protein [Trichormus sp. M33_DOE_039] | diamond | 1395 | 118 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Trichormus | Trichormus sp. M33_DOE_039 | |
| 30214047 | 30214047 | PRJNA917598_P_NODE_26312_length_450_cov_1.413793_g25368_i0 | PRJNA917598 | 26312 | 450 | 1.413793 | 6.3620685 | Limnothrix redekei | 132606 | Bacteria | Bacteria | 186 | 1.7199999999999998e-54 | NR | WP_393011443.1 | 132606 | g25368 | i0 | 83.7 | 2.76 | 104 | 17 | 69.3 | 0 | 449 | 138 | 280 | 383 | WP_393011443.1 N-acetyl sugar amidotransferase [Limnothrix redekei] | diamond | 1242 | 186 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Pseudanabaenales | Pseudanabaenaceae | Limnothrix | Limnothrix redekei | |
| 31098698 | 31098698 | PRJNA917598_P_NODE_14675_length_615_cov_3.121771_g13741_i0 | PRJNA917598 | 14675 | 615 | 3.121771 | 19.19889165 | Synechococcus elongatus UTEX 2973 | 1350461 | Bacteria | Bacteria | 70.9 | 1.63e-12 | NR | AJD58901.1 | 1350461 | g13741 | i0 | 52.4 | 0.307317073170732 | 63 | 30 | 30.7 | 0 | 343 | 155 | 1 | 63 | AJD58901.1 hypothetical protein M744_10830 [Synechococcus elongatus UTEX 2973] | diamond | 189 | 70.9 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Synechococcaceae | Synechococcus | Synechococcus elongatus | |
| 31383594 | 31383594 | PRJNA917598_P_NODE_92736_length_243_cov_0.905882_g91792_i0 | PRJNA917598 | 92736 | 243 | 0.905882 | 2.20129326 | Microcoleus sp. SM1_3_4 | 2720457 | Bacteria | Bacteria | 54.7 | 4.63e-7 | NR | NJL66832.1 | 2720457 | g91792 | i0 | 43.5 | 2.2962962962963 | 62 | 31 | 76.5 | 1 | 1 | 186 | 18 | 75 | NJL66832.1 hypothetical protein [Microcoleus sp. SM1_3_4] | diamond | 558 | 54.7 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Microcoleus | Microcoleus sp. SM1_3_4 | |
| 31667994 | 31667994 | PRJNA917598_P_NODE_24677_length_465_cov_2.198980_g23734_i0 | PRJNA917598 | 24677 | 465 | 2.19898 | 10.225257 | Planktothrix mougeotii | 54306 | Bacteria | Bacteria | 96.3 | 2.5300000000000003e-21 | NR | WP_193869616.1 | 54306 | g23734 | i0 | 47.4 | 2.4258064516129 | 95 | 50 | 61.3 | 0 | 172 | 456 | 1 | 95 | WP_193869616.1 macro domain-containing protein [Planktothrix mougeotii] | diamond | 1128 | 96.3 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Planktothrix | Planktothrix mougeotii | |
| 31770257 | 31770257 | PRJNA917598_P_NODE_88317_length_246_cov_0.890173_g87373_i0 | PRJNA917598 | 88317 | 246 | 0.890173 | 2.18982558 | Cyanophyceae | 3028117 | Bacteria | Bacteria | 100 | 1.53e-22 | NR | WP_017719947.1 | 1173028 | g87373 | i0 | 90.4 | 1.26829268292683 | 52 | 5 | 63.4 | 0 | 246 | 91 | 398 | 449 | WP_017719947.1 TldD/PmbA family protein [Oscillatoria sp. PCC 10802] | diamond | 312 | 101 | 0.99009900990099 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Oscillatoriaceae | Oscillatoria | Oscillatoria sp. PCC 10802 | |
| 32711385 | 32711385 | PRJNA917598_P_NODE_37680_length_374_cov_1.279070_g36736_i0 | PRJNA917598 | 37680 | 374 | 1.27907 | 4.7837218 | Rivularia sp. MS3 | 3012223 | Bacteria | Bacteria | 46.6 | 0.00683 | NR | MBV6621788.1 | 3012223 | g36736 | i0 | 39.6 | 1.0668449197861 | 48 | 29 | 38.5 | 0 | 267 | 124 | 456 | 503 | MBV6621788.1 cellulase family glycosylhydrolase [Rivularia sp. MS3] | diamond | 399 | 46.6 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Rivulariaceae | Rivularia | Rivularia sp. MS3 | |
| 32907601 | 32907601 | PRJNA917598_P_NODE_76220_length_258_cov_1.670270_g75276_i0 | PRJNA917598 | 76220 | 258 | 1.67027 | 4.3092966 | Cyanobacteriota/Melainabacteria group | 1798711 | Bacteria | Bacteria | 145 | 5.9099999999999996e-40 | NR | WP_115016674.1 | 368503 | g75276 | i0 | 78.6 | 8.81395348837209 | 84 | 18 | 97.7 | 0 | 5 | 256 | 7 | 90 | WP_115016674.1 GDP-mannose 4,6-dehydratase [Synechococcus sp. UW140] | diamond | 2274 | 146 | 0.993150684931507 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Synechococcaceae | Synechococcus | Synechococcus sp. UW140 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;