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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA917598" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 9 ✖

bioproject 1

  • PRJNA917598 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22573105 22573105 PRJNA917598_P_NODE_43818_length_347_cov_1.124088_g42874_i0 PRJNA917598 43818 347 1.124088 3.90058536 Methanobrevibacter sp. 66852 Archaea Archaea 55.5 4.43e-6   NR MBO7696940.1 66852 g42874 i0 52.1 0.613832853025937 71 26 61.4 2 313 101 232 294 MBO7696940.1 methyl-accepting chemotaxis protein [Methanobrevibacter sp.] diamond 213 55.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
24202663 24202663 PRJNA917598_P_NODE_15699_length_593_cov_1.184615_g14765_i0 PRJNA917598 15699 593 1.184615 7.02476695 Methanobacteriaceae archaeon 2099680 Archaea Archaea 249 8.13e-77   NR MBX7076496.1 2099680 g14765 i0 63.8 0.991568296795953 196 70 99.2 1 5 592 90 284 MBX7076496.1 F0F1 ATP synthase subunit alpha [Methanobacteriaceae archaeon] diamond 588 249 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
27189825 27189825 PRJNA917598_P_NODE_44602_length_344_cov_0.959410_g43658_i0 PRJNA917598 44602 344 0.95941 3.3003704 root 1 Root_unresolved Root_unresolved 234 2.18e-70   NR 4AHC_A 2261 g43658 i0 98.2 1.98837209302326 114 2 99.4 0 3 344 442 555 4AHC_A Chain A, DNA POLYMERASE [Pyrococcus furiosus] diamond 684 236 0.991525423728814 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
27277640 27277640 PRJNA917598_P_NODE_72743_length_266_cov_1.590674_g71799_i0 PRJNA917598 72743 266 1.590674 4.23119284 Acidiplasma aeolicum 507754 Archaea Archaea 148 1.43e-41   NR WP_393917166.1 507754 g71799 i0 81.8 0.992481203007519 88 16 99.2 0 264 1 34 121 WP_393917166.1 NADH-quinone oxidoreductase subunit NuoH [Acidiplasma aeolicum] diamond 264 148 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales Ferroplasmaceae Acidiplasma Acidiplasma aeolicum
27435702 27435702 PRJNA917598_P_NODE_58383_length_296_cov_1.470852_g57439_i0 PRJNA917598 58383 296 1.470852 4.35372192 Pyrococcus furiosus 2261 Archaea Archaea 193 2.5899999999999992e-55   NR 4AHC_A 2261 g57439 i0 98 0.993243243243243 98 2 99.3 0 1 294 95 192 4AHC_A Chain A, DNA POLYMERASE [Pyrococcus furiosus] diamond 294 193 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
28926696 28926696 PRJNA917598_P_NODE_19248_length_532_cov_1.675381_g18311_i0 PRJNA917598 19248 532 1.675381 8.91302692 root 1 Root_unresolved Root_unresolved 348 4.6e-113   NR 4AHC_A 2261 g18311 i0 100 1.99624060150376 177 0 99.8 0 532 2 571 747 4AHC_A Chain A, DNA POLYMERASE [Pyrococcus furiosus] diamond 1062 348 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
29014485 29014485 PRJNA917598_P_NODE_43748_length_347_cov_1.660584_g42804_i0 PRJNA917598 43748 347 1.660584 5.76222648 Halorarius halobius 2962671 Archaea Archaea 45.1 0.0188   NR WP_255149426.1 2962671 g42804 i0 32.3 0.804034582132565 93 63 80.4 0 320 42 730 822 WP_255149426.1 AAA domain-containing protein [Halorarius halobius] diamond 279 45.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halorarius Halorarius halobius
29874031 29874031 PRJNA917598_P_NODE_96691_length_234_cov_2.347826_g95747_i0 PRJNA917598 96691 234 2.347826 5.49391284 root 1 Root_unresolved Root_unresolved 156 3.089999999999999e-42   NR 4AHC_A 2261 g95747 i0 100 2 78 0 100 0 234 1 257 334 4AHC_A Chain A, DNA POLYMERASE [Pyrococcus furiosus] diamond 468 156 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
30467319 30467319 PRJNA917598_P_NODE_80153_length_251_cov_0.865169_g79209_i0 PRJNA917598 80153 251 0.865169 2.17157419 Methanoregulaceae archaeon 2485498 Archaea Archaea 44.3 0.0112   NR HOT94242.1 2485498 g79209 i0 47.9 0.573705179282869 48 13 57.4 2 101 244 298 333 HOT94242.1 radical SAM protein [Methanoregulaceae archaeon] diamond 144 44.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;