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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA917598" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 24 ✖

bioproject 1

  • PRJNA917598 · 24 ✖

analysis 1

  • diamond · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3447452 3447452 PRJNA917598_P_NODE_64943_length_282_cov_1.220096_g63999_i0 PRJNA917598 64943 282 1.220096 3.44067072 Thecamoeba quadrilineata 343530 Discosea other_Eukaryota 130 3.72e-35   NR YP_010576297.1 343530 g63999 i0 70 0.957446808510638 90 25 93.6 1 18 281 102 191 YP_010576297.1 hypothetical protein OYV93_mgp28 [Thecamoeba quadrilineata] diamond 270 130 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba quadrilineata
8549821 8549821 PRJNA917598_P_NODE_76327_length_258_cov_1.578378_g75383_i0 PRJNA917598 76327 258 1.578378 4.07221524 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 92.8 1.2800000000000001e-22   NR XP_628995.1 352472 g75383 i0 66.2 0.755813953488372 65 22 75.6 0 3 197 12 76 XP_628995.1 40S ribosomal protein S21 [Dictyostelium discoideum AX4] diamond 195 92.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
11100805 11100805 PRJNA917598_P_NODE_95809_length_241_cov_0.916667_g94865_i0 PRJNA917598 95809 241 0.916667 2.20916747 Cavenderia fasciculata 261658 Evosea other_Eukaryota 98.2 2.3e-23   NR XP_004358333.1 261658 g94865 i0 70.6 0.846473029045643 68 20 84.6 0 240 37 124 191 XP_004358333.1 Rab GTPase [Cavenderia fasciculata] diamond 204 98.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
25122384 25122384 PRJNA917598_P_NODE_54020_length_310_cov_2.907173_g53076_i0 PRJNA917598 54020 310 2.907173 9.0122363 Thecamoeba quadrilineata 343530 Discosea other_Eukaryota 154 2.23e-43   NR YP_010576281.1 343530 g53076 i0 70.2 1.00645161290323 104 30 99.7 1 310 2 156 259 YP_010576281.1 ribosomal protein L2 [Thecamoeba quadrilineata] diamond 312 154 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba quadrilineata
26683599 26683599 PRJNA917598_P_NODE_86241_length_247_cov_0.885057_g85297_i0 PRJNA917598 86241 247 0.885057 2.18609079 Dictyosteliaceae 2058185 Evosea other_Eukaryota 78.6 4.95e-15   NR XP_003283098.1 5786 g85297 i0 43.8 6.78947368421053 80 45 97.2 0 243 4 201 280 XP_003283098.1 uncharacterized protein DICPUDRAFT_52080 [Dictyostelium purpureum] diamond 1677 79 0.994936708860759 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
27253088 27253088 PRJNA917598_P_NODE_93903_length_242_cov_0.911243_g92959_i0 PRJNA917598 93903 242 0.911243 2.20520806 Dictyostelium 5782 Evosea other_Eukaryota 95.5 8.340000000000001e-21   NR XP_003288843.1 5786 g92959 i0 55.3 9.44628099173554 76 34 94.2 0 14 241 204 279 XP_003288843.1 dynein light intermediate chain [Dictyostelium purpureum] diamond 2286 95.9 0.995828988529718 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
27506083 27506083 PRJNA917598_P_NODE_56163_length_303_cov_2.000000_g55219_i0 PRJNA917598 56163 303 2 6.06 root 1 Root_unresolved Root_unresolved 79.3 4.13e-16   NR 2O6M_A 5791 g55219 i0 44 3.96039603960396 100 51 99 3 302 3 3 97 2O6M_A Chain A, Intron-encoded endonuclease I-PpoI [Physarum polycephalum] diamond 1200 79.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
27530174 27530174 PRJNA917598_P_NODE_68523_length_275_cov_1.381188_g67579_i0 PRJNA917598 68523 275 1.381188 3.798267 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 54.7 3.27e-6   NR KAH3760035.1 1580589 g67579 i0 44.3 1.58181818181818 61 31 63.3 2 11 184 74 134 KAH3760035.1 Endonuclease/exonuclease/phosphatase family protein [Pelomyxa schiedti] diamond 435 54.7 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
27663925 27663925 PRJNA917598_P_NODE_73444_length_265_cov_0.848958_g72500_i0 PRJNA917598 73444 265 0.848958 2.2497387 root 1 Root_unresolved Root_unresolved 119 4.94e-31   NR XP_004367664.1 1257118 g72500 i0 59.8 2.94339622641509 87 35 98.5 0 263 3 169 255 XP_004367664.1 phytanoylCoA dioxygenase [Acanthamoeba castellanii str. Neff] diamond 780 119 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28098473 28098473 PRJNA917598_P_NODE_88625_length_245_cov_1.790698_g87681_i0 PRJNA917598 88625 245 1.790698 4.3872101 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 124 8.84e-31   NR XP_004348506.1 1257118 g87681 i0 70.4 2.00816326530612 81 24 99.2 0 2 244 306 386 XP_004348506.1 cleavage and polyadenylation specific factor 3like, putative [Acanthamoeba castellanii str. Neff] diamond 492 124 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28161868 28161868 PRJNA917598_P_NODE_91005_length_244_cov_0.900585_g90061_i0 PRJNA917598 91005 244 0.900585 2.1974274 Entamoeba invadens IP1 370355 Evosea other_Eukaryota 67.8 5.54e-11   NR XP_004182963.1 370355 g90061 i0 43.7 4.27868852459016 87 38 95.9 2 239 6 188 272 XP_004182963.1 Gelation factor, putative [Entamoeba invadens IP1] diamond 1044 67.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
28287770 28287770 PRJNA917598_P_NODE_50626_length_322_cov_1.236948_g49682_i0 PRJNA917598 50626 322 1.236948 3.98297256 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 77.4 1.51e-15   NR KAH3761564.1 1580589 g49682 i0 38.9 0.838509316770186 90 54 83.9 1 32 301 44 132 KAH3761564.1 hypothetical protein Pelo_6567 [Pelomyxa schiedti] diamond 270 77.4 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
29014531 29014531 PRJNA917598_P_NODE_89228_length_245_cov_0.895349_g88284_i0 PRJNA917598 89228 245 0.895349 2.19360505 Dictyostelium purpureum 5786 Evosea other_Eukaryota 43.9 0.0124   NR XP_003291102.1 5786 g88284 i0 35.4 1.38367346938776 79 41 96.7 2 243 7 124 192 XP_003291102.1 uncharacterized protein DICPUDRAFT_92611, partial [Dictyostelium purpureum] diamond 339 43.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
29077486 29077486 PRJNA917598_P_NODE_81248_length_250_cov_0.870056_g80304_i0 PRJNA917598 81248 250 0.870056 2.17514 Entamoeba invadens IP1 370355 Evosea other_Eukaryota 60.5 7.87e-9   NR XP_004256514.1 370355 g80304 i0 38.8 0.96 80 48 96 1 245 6 100 178 XP_004256514.1 hypothetical protein EIN_424250 [Entamoeba invadens IP1] diamond 240 60.5 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
29715801 29715801 PRJNA917598_P_NODE_91010_length_244_cov_0.900585_g90066_i0 PRJNA917598 91010 244 0.900585 2.1974274 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 44.3 0.0108   NR KYQ90547.1 361077 g90066 i0 34.9 3.33196721311475 63 41 77.5 0 217 29 65 127 KYQ90547.1 RabGAP/TBC domain-containing protein [Tieghemostelium lacteum] diamond 813 44.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
29898417 29898417 PRJNA917598_P_NODE_89511_length_245_cov_0.895349_g88567_i0 PRJNA917598 89511 245 0.895349 2.19360505 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 62.8 3.37e-9   NR PRP77174.1 1890364 g88567 i0 41.3 0.918367346938776 75 41 91.8 2 226 2 437 508 PRP77174.1 hypothetical protein PROFUN_14515 [Planoprotostelium fungivorum] diamond 225 62.8 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30024843 30024843 PRJNA917598_P_NODE_85591_length_247_cov_1.488506_g84647_i0 PRJNA917598 85591 247 1.488506 3.67660982 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 100 5.31e-23   NR PRP77480.1 1890364 g84647 i0 69.4 0.874493927125506 72 21 87.4 1 31 246 4 74 PRP77480.1 dihydrouridine synthase [Planoprotostelium fungivorum] diamond 216 100 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30782936 30782936 PRJNA917598_P_NODE_81214_length_250_cov_0.870056_g80270_i0 PRJNA917598 81214 250 0.870056 2.17514 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 43.5 0.0202   NR KYQ91827.1 361077 g80270 i0 32.8 0.768 64 39 74.4 2 203 18 140 201 KYQ91827.1 Sec13-like protein [Tieghemostelium lacteum] diamond 192 43.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
30877717 30877717 PRJNA917598_P_NODE_94034_length_242_cov_0.911243_g93090_i0 PRJNA917598 94034 242 0.911243 2.20520806 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 116 3.76e-28   NR XP_004340273.1 1257118 g93090 i0 69.2 0.966942148760331 78 24 96.7 0 237 4 186 263 XP_004340273.1 telomeraseassociated protein 1, putative [Acanthamoeba castellanii str. Neff] diamond 234 116 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31004206 31004206 PRJNA917598_P_NODE_88494_length_246_cov_0.861272_g87550_i0 PRJNA917598 88494 246 0.861272 2.11872912 Polysphondylium violaceum 133409 Evosea other_Eukaryota 47 0.00109   NR KAF2071965.1 133409 g87550 i0 37.5 0.975609756097561 80 47 97.6 2 4 243 171 247 KAF2071965.1 hypothetical protein CYY_006721 [Polysphondylium violaceum] diamond 240 47 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
31137493 31137493 PRJNA917598_P_NODE_70835_length_270_cov_1.532995_g69891_i0 PRJNA917598 70835 270 1.532995 4.1390865 root 1 Root_unresolved Root_unresolved 51.2 5.19e-5   NR XP_004333230.1 1257118 g69891 i0 40 2.7 90 47 95.6 2 13 270 258 344 XP_004333230.1 RNA ligase [Acanthamoeba castellanii str. Neff] diamond 729 51.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31478541 31478541 PRJNA917598_P_NODE_81876_length_250_cov_0.870056_g80932_i0 PRJNA917598 81876 250 0.870056 2.17514 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 95.1 1.55e-20   NR XP_004341725.1 1257118 g80932 i0 71.7 1.452 60 17 72 0 183 4 5 64 XP_004341725.1 RecF/RecN/SMC domain containing protein [Acanthamoeba castellanii str. Neff] diamond 363 95.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31478554 31478554 PRJNA917598_P_NODE_94596_length_242_cov_0.911243_g93652_i0 PRJNA917598 94596 242 0.911243 2.20520806 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 89 1.94e-19   NR XP_004340229.1 1257118 g93652 i0 65.4 0.966942148760331 78 24 96.7 2 6 239 49 123 XP_004340229.1 ribosomal protein L6e, putative [Acanthamoeba castellanii str. Neff] diamond 234 89 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31857814 31857814 PRJNA917598_P_NODE_86017_length_247_cov_0.885057_g85073_i0 PRJNA917598 86017 247 0.885057 2.18609079 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 57.4 2.62e-7   NR PRP78954.1 1890364 g85073 i0 34.9 2.04048582995951 83 46 97.2 2 242 3 427 504 PRP78954.1 poly polymerase [Planoprotostelium fungivorum] diamond 504 57.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;