RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA915212" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

tax_kingdom 1

bioproject 1

  • PRJNA915212 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31604855 31604855 PRJNA915212_P_NODE_11056_length_172_cov_1.504065_g11018_i0 PRJNA915212 11056 172 1.504065 2.5869918 Virus NIOZ-UU159 2763270 Viruses Viruses 44.3 7.86e-4   NR QPI16597.1 2763270 g11018 i0 61.3 0.540697674418605 31 12 54.1 0 99 7 51 81 QPI16597.1 MAG: hypothetical protein NIOZUU159_00088 [Virus NIOZ-UU159] diamond 93 44.3 1 Viruses               Virus NIOZ-UU159
32205923 32205923 PRJNA915212_P_NODE_7038_length_220_cov_1.777778_g7000_i0 PRJNA915212 7038 220 1.777778 3.9111116 Edafosvirus sp. 2487765 Viruses Viruses 113 1.5e-27   NR AYV78014.1 2487765 g7000 i0 69.9 1.97727272727273 73 22 99.5 0 220 2 330 402 AYV78014.1 MAG: elongation factor 1 alpha long form [Edafosvirus sp.] diamond 435 113 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Edafosvirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;