RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA915212" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA915212 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9823017 9823017 PRJNA915212_P_NODE_2068_length_460_cov_2.340633_g2033_i0 PRJNA915212 2068 460 2.340633 10.7669118 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 222 1.1799999999999998e-69   NR MES1911029.1 1215613 g2033 i0 71.1 3 152 44 99.1 0 458 3 1 152 MES1911029.1 hypothetical protein [Cercozoa sp. M6MM] diamond 1380 222 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
13648734 13648734 PRJNA915212_P_NODE_1791_length_496_cov_2.040268_g1756_i0 PRJNA915212 1791 496 2.040268 10.11972928 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 229 8.23e-75   NR ADK26622.1 323453 g1756 i0 82.3 0.786290322580645 130 23 78.6 0 470 81 1 130 ADK26622.1 rps22a [Heteromita sp. PRA-74] diamond 390 229 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
26898112 26898112 PRJNA915212_P_NODE_5141_length_263_cov_2.144860_g5103_i0 PRJNA915212 5141 263 2.14486 5.6409818 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 70.9 1.27e-13   NR MES1912547.1 1215613 g5103 i0 55 0.91254752851711 80 35 91.3 1 263 24 5 83 MES1912547.1 hypothetical protein [Cercozoa sp. M6MM] diamond 240 70.9 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;