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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA914897" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 7 ✖

bioproject 1

  • PRJNA914897 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26644457 26644457 PRJNA914897_P_NODE_2381_length_1256_cov_1.918850_g2169_i0 PRJNA914897 2381 1256 1.91885 24.100756 Methanobrevibacter sp. 66852 Archaea Archaea 52.4 0.00429   NR WP_292749283.1 66852 g2169 i0 28.7 0.32484076433121 136 84 29.4 3 430 62 268 403 WP_292749283.1 C1 family peptidase [Methanobrevibacter sp.] diamond 408 52.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
28982736 28982736 PRJNA914897_P_NODE_27928_length_303_cov_1.339130_g27504_i0 PRJNA914897 27928 303 1.33913 4.0575639 Methanothermobacter marburgensis 145263 Archaea Archaea 52 4.32e-5   NR WP_013295055.1 145263 g27504 i0 38.9 6.05940594059406 72 42 71.3 1 88 303 338 407 WP_013295055.1 IGHMBP2 family helicase [Methanothermobacter marburgensis] diamond 1836 52 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanothermobacter Methanothermobacter marburgensis
29361435 29361435 PRJNA914897_P_NODE_23729_length_338_cov_1.528302_g23305_i0 PRJNA914897 23729 338 1.528302 5.16566076 Methanobrevibacter sp. 66852 Archaea Archaea 60.5 7.03e-8   NR WP_292800363.1 66852 g23305 i0 41.1 1.29585798816568 73 38 61.2 2 1 207 922 993 WP_292800363.1 hypothetical protein [Methanobrevibacter sp.] diamond 438 60.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
30687931 30687931 PRJNA914897_P_NODE_34893_length_260_cov_1.235294_g34469_i0 PRJNA914897 34893 260 1.235294 3.2117644 Methanobrevibacter sp. 66852 Archaea Archaea 43.5 0.0105   NR WP_345895079.1 66852 g34469 i0 36.4 0.888461538461538 77 42 86.5 3 20 244 56 127 WP_345895079.1 hypothetical protein [Methanobrevibacter sp.] diamond 231 43.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31390864 31390864 PRJNA914897_P_NODE_5076_length_888_cov_2.592638_g4734_i0 PRJNA914897 5076 888 2.592638 23.02262544 root 1 Root_unresolved Root_unresolved 60.8 2.38e-6   NR MBO7518105.1 66852 g4734 i0 47.4 1.05743243243243 57 29 18.9 1 519 686 415 471 MBO7518105.1 hypothetical protein [Methanobrevibacter sp.] diamond 939 60.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31446642 31446642 PRJNA914897_P_NODE_31036_length_282_cov_2.014354_g30612_i0 PRJNA914897 31036 282 2.014354 5.68047828 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 42.7 0.018   NR WP_296881009.1 253161 g30612 i0 37.1 0.659574468085106 62 39 66 0 237 52 42 103 WP_296881009.1 hypothetical protein [uncultured Methanobrevibacter sp.] diamond 186 42.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
32529852 32529852 PRJNA914897_P_NODE_10379_length_583_cov_1.650980_g9962_i0 PRJNA914897 10379 583 1.65098 9.6252134 root 1 Root_unresolved Root_unresolved 84.7 3.99e-16   NR MDR3292372.1 66852 g9962 i0 33.5 3.89536878216123 194 109 91.6 6 536 3 10 199 MDR3292372.1 aquaporin family protein [Methanobrevibacter sp.] diamond 2271 85.5 0.990643274853801 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;