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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA911178" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA911178 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27213901 27213901 PRJNA911178_P_NODE_124202_length_330_cov_1.486381_g121730_i0 PRJNA911178 124202 330 1.486381 4.9050573 Pyrodictium abyssi 54256 Archaea Archaea 42 0.048   NR WP_338249940.1 54256 g121730 i0 34.8 0.6 66 37 60 2 78 275 45 104 WP_338249940.1 hypothetical protein [Pyrodictium abyssi] diamond 198 42 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Pyrodictiaceae Pyrodictium Pyrodictium abyssi
27593365 27593365 PRJNA911178_P_NODE_233204_length_254_cov_1.756906_g230730_i0 PRJNA911178 233204 254 1.756906 4.46254124 Thermoproteota archaeon 2056631 Archaea Archaea 94.4 1.47e-23   NR MEM3368604.1 2056631 g230730 i0 94 0.590551181102362 50 3 59.1 0 72 221 1 50 MEM3368604.1 hypothetical protein [Thermoproteota archaeon] diamond 150 94.4 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
27593370 27593370 PRJNA911178_P_NODE_248084_length_250_cov_0.870056_g245610_i0 PRJNA911178 248084 250 0.870056 2.17514 Thermoproteota archaeon 2056631 Archaea Archaea 115 1.9099999999999998e-31   NR MDP9211234.1 2056631 g245610 i0 100 0.708 59 0 70.8 0 178 2 1 59 MDP9211234.1 U6 snRNA-associated Sm-like protein LSm6 [Thermoproteota archaeon] diamond 177 115 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
31098599 31098599 PRJNA911178_P_NODE_293095_length_241_cov_0.916667_g290621_i0 PRJNA911178 293095 241 0.916667 2.20916747 Thermoproteota archaeon 2056631 Archaea Archaea 146 1.0999999999999999e-38   NR MEM3368526.1 2056631 g290621 i0 90 0.995850622406639 80 8 99.6 0 2 241 26 105 MEM3368526.1 baseplate J/gp47 family protein [Thermoproteota archaeon] diamond 240 146 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
31541573 31541573 PRJNA911178_P_NODE_73196_length_413_cov_1.320588_g70733_i0 PRJNA911178 73196 413 1.320588 5.45402844 Thermoproteota archaeon 2056631 Archaea Archaea 269 5.25e-86   NR MEM3368575.1 2056631 g70733 i0 94.9 0.987893462469734 136 7 98.8 0 4 411 208 343 MEM3368575.1 hypothetical protein [Thermoproteota archaeon] diamond 408 269 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;