RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA911178" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA911178 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16194316 16194316 PRJNA911178_P_NODE_133133_length_320_cov_3.631579_g130660_i0 PRJNA911178 133133 320 3.631579 11.6210528 Nematocida sp. AWRm8 1927920 Fungi Fungi 79 1.23e-14   NR KAI5181725.1 2670343 g130660 i0 57.7 0.73125 78 32 73.1 1 3 236 33 109 KAI5181725.1 hypothetical protein NEOKW01_1889, partial [Nematocida sp. AWRm80] diamond 234 79 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida sp. AWRm80
27561365 27561365 PRJNA911178_P_NODE_175044_length_286_cov_1.272300_g172571_i0 PRJNA911178 175044 286 1.2723 3.638778 Mitosporidium daphniae 1485682 Fungi Fungi 75.9 1.27e-13   NR XP_013239596.1 1485682 g172571 i0 43.8 1.00699300699301 96 50 96.5 2 9 284 339 434 XP_013239596.1 ubiquitin carboxyl-terminal hydrolase [Mitosporidium daphniae] diamond 288 75.9 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
29645102 29645102 PRJNA911178_P_NODE_306130_length_222_cov_7.838926_g303656_i0 PRJNA911178 306130 222 7.838926 17.40241572 Nematocida parisii 586133 Fungi Fungi 55.8 6.37e-7   NR KAI5159699.1 586133 g303656 i0 64 0.675675675675676 50 17 66.2 1 6 152 76 125 KAI5159699.1 hypothetical protein NEPAR05_2515, partial [Nematocida parisii] diamond 150 55.8 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida parisii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;