RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA911178" and tax_phylum = "Candidatus Dormiibacterota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA911178 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26675973 26675973 PRJNA911178_P_NODE_252661_length_249_cov_0.875000_g250187_i0 PRJNA911178 252661 249 0.875 2.17875 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 122 5.72e-33   NR HEV7678348.1 2052315 g250187 i0 77.2 1.93975903614458 79 18 95.2 0 245 9 100 178 HEV7678348.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 483 122 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29645087 29645087 PRJNA911178_P_NODE_255990_length_248_cov_0.880000_g253516_i0 PRJNA911178 255990 248 0.88 2.1824 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 141 1.77e-38   NR MDQ6918955.1 2052315 g253516 i0 92.6 0.979838709677419 81 6 98 0 247 5 237 317 MDQ6918955.1 alanine--glyoxylate aminotransferase family protein [Candidatus Dormiibacterota bacterium] diamond 243 141 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29834889 29834889 PRJNA911178_P_NODE_217671_length_262_cov_1.592593_g215197_i0 PRJNA911178 217671 262 1.592593 4.17259366 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 95.5 4.78e-23   NR MBV9099682.1 2052315 g215197 i0 56.4 0.893129770992366 78 34 89.3 0 7 240 29 106 MBV9099682.1 glycine cleavage system protein GcvH [Candidatus Dormiibacterota bacterium] diamond 234 95.5 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
30055946 30055946 PRJNA911178_P_NODE_296411_length_239_cov_2.578313_g293937_i0 PRJNA911178 296411 239 2.578313 6.16216807 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 82 1.94e-16   NR HWZ99116.1 2052315 g293937 i0 86.7 1.12970711297071 45 6 56.5 0 238 104 263 307 HWZ99116.1 IS1595 family transposase [Candidatus Dormiibacterota bacterium] diamond 270 82 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;