RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA909412" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA909412 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16551671 16551671 PRJNA909412_P_NODE_1353_length_474_cov_3.337931_g1214_i0 PRJNA909412 1353 474 3.337931 15.82179294 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 241 1.05e-74   NR NUQ35036.1 2026779 g1214 i0 64.6 5.6075949367088596 178 41 98.7 1 2 469 97 274 NUQ35036.1 adenosylhomocysteinase [Planctomycetaceae bacterium] diamond 2658 241 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
26897966 26897966 PRJNA909412_P_NODE_13481_length_160_cov_2.851240_g13340_i0 PRJNA909412 13481 160 2.85124 4.561984 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 50.4 2.23e-5   NR MCE5340208.1 2026779 g13340 i0 47.4 2.1375 57 25 97.5 1 3 158 828 884 MCE5340208.1 translation initiation factor IF-2 [Planctomycetaceae bacterium] diamond 342 50.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
27118987 27118987 PRJNA909412_P_NODE_16222_length_152_cov_2.123894_g16081_i0 PRJNA909412 16222 152 2.123894 3.22831888 Phycisphaerales bacterium 2052180 Bacteria Bacteria 90.5 9.5e-20   NR MCI0362746.1 2052180 g16081 i0 85.1 10.1052631578947 47 7 92.8 0 11 151 151 197 MCI0362746.1 MmgE/PrpD family protein [Phycisphaerales bacterium] diamond 1536 90.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
29203609 29203609 PRJNA909412_P_NODE_12169_length_163_cov_2.016129_g12028_i0 PRJNA909412 12169 163 2.016129 3.28629027 Planctomycetota bacterium 2026780 Bacteria Bacteria 80.5 5.94e-16   NR MBM3984144.1 2026780 g12028 i0 73.5 7.38036809815951 49 13 90.2 0 154 8 302 350 MBM3984144.1 M20/M25/M40 family metallo-hydrolase [Planctomycetota bacterium] diamond 1203 80.5 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31478324 31478324 PRJNA909412_P_NODE_3816_length_269_cov_1.073913_g3675_i0 PRJNA909412 3816 269 1.073913 2.88882597 Planctomycetota bacterium 2026780 Bacteria Bacteria 83.2 4.8e-17   NR MCB9913063.1 2026780 g3675 i0 55.7 2.63197026022305 79 34 88.1 1 267 31 171 248 MCB9913063.1 SDR family oxidoreductase [Planctomycetota bacterium] diamond 708 83.2 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31699578 31699578 PRJNA909412_P_NODE_11217_length_171_cov_1.727273_g11076_i0 PRJNA909412 11217 171 1.727273 2.95363683 Phycisphaerales bacterium 2052180 Bacteria Bacteria 41.2 0.0498   NR HZW05812.1 2052180 g11076 i0 50 0.631578947368421 36 14 56.1 1 52 147 40 75 HZW05812.1 class I SAM-dependent methyltransferase [Phycisphaerales bacterium] diamond 108 41.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
32015861 32015861 PRJNA909412_P_NODE_4978_length_234_cov_1.487179_g4837_i0 PRJNA909412 4978 234 1.487179 3.47999886 Planctomycetota bacterium 2026780 Bacteria Bacteria 71.2 3.05e-12   NR PCH78894.1 2026780 g4837 i0 46.7 0.961538461538462 75 40 96.2 0 234 10 545 619 PCH78894.1 MAG: hypothetical protein COB96_04960 [Planctomycetota bacterium] diamond 225 71.2 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32079118 32079118 PRJNA909412_P_NODE_9478_length_174_cov_2.681481_g9337_i0 PRJNA909412 9478 174 2.681481 4.66577694 Phycisphaerales bacterium 2052180 Bacteria Bacteria 49.3 7.01e-5   NR MCH2162015.1 2052180 g9337 i0 40 1.86206896551724 55 31 91.4 1 8 166 359 413 MCH2162015.1 MmgE/PrpD family protein [Phycisphaerales bacterium] diamond 324 49.3 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
32427285 32427285 PRJNA909412_P_NODE_1239_length_502_cov_3.231102_g1100_i0 PRJNA909412 1239 502 3.231102 16.22013204 Planctomycetota bacterium 2026780 Bacteria Bacteria 171 1.12e-48   NR MCD6378656.1 2026780 g1100 i0 52.5 1.91235059760956 160 75 95 1 486 10 84 243 MCD6378656.1 Gfo/Idh/MocA family oxidoreductase [Planctomycetota bacterium] diamond 960 171 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;