RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA909412" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA909412 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27663878 27663878 PRJNA909412_P_NODE_1464_length_455_cov_3.367788_g1325_i0 PRJNA909412 1464 455 3.367788 15.3234354 Bacillati 1783272 Bacteria Bacteria 77.4 1.94e-14   NR MFO8037463.1 2073117 g1325 i0 50 5.98681318681319 78 39 51.4 0 46 279 105 182 MFO8037463.1 hypothetical protein [Anaerolineales bacterium] diamond 2724 77.8 0.994858611825193 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32332642 32332642 PRJNA909412_P_NODE_5319_length_226_cov_2.090909_g5178_i0 PRJNA909412 5319 226 2.090909 4.72545434 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 72 1.4e-12   NR MCC7365802.1 2026734 g5178 i0 47.4 4.00884955752212 76 39 99.6 1 2 226 324 399 MCC7365802.1 aminopeptidase P family protein [Dehalococcoidia bacterium] diamond 906 72 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;