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contig_metadata

28 rows where analysis = "diamond", bioproject = "PRJNA908278" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 28 ✖

bioproject 1

  • PRJNA908278 · 28 ✖

analysis 1

  • diamond · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
890439 890439 PRJNA908278_P_NODE_61_length_2445_cov_4.557336_g51_i0 PRJNA908278 61 2445 4.557336 111.4268652 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 1105 0   NR WP_295614768.1 253161 g51 i0 66.5 1.97914110429448 805 269 98.7 1 2414 3 1 805 WP_295614768.1 GTP-binding protein [uncultured Methanobrevibacter sp.] diamond 4839 1105 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
9818142 9818142 PRJNA908278_P_NODE_22508_length_273_cov_2.070000_g22405_i0 PRJNA908278 22508 273 2.07 5.6511 Methanobacteriota archaeon 2026739 Archaea Archaea 95.1 7.1e-21   NR NCF97807.1 2026739 g22405 i0 58.1 3.37362637362637 62 26 68.1 0 187 2 261 322 NCF97807.1 peptide-methionine (R)-S-oxide reductase MsrB [Methanobacteriota archaeon] diamond 921 95.1 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
26739061 26739061 PRJNA908278_P_NODE_29681_length_247_cov_3.097701_g29578_i0 PRJNA908278 29681 247 3.097701 7.65132147 Methanobrevibacter arboriphilus 39441 Archaea Archaea 62.4 4.83e-9   NR WP_158082511.1 39441 g29578 i0 41.5 4.16599190283401 65 35 78.9 1 32 226 38 99 WP_158082511.1 Ig-like domain repeat protein [Methanobrevibacter arboriphilus] diamond 1029 62.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter arboriphilus
26866430 26866430 PRJNA908278_P_NODE_4621_length_538_cov_1.324731_g4518_i0 PRJNA908278 4621 538 1.324731 7.12705278 Methanobrevibacter sp. 66852 Archaea Archaea 50.4 0.00113   NR MEE3491292.1 66852 g4518 i0 28.7 0.602230483271376 108 75 59.7 2 522 202 24 130 MEE3491292.1 hypothetical protein [Methanobrevibacter sp.] diamond 324 50.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
27245609 27245609 PRJNA908278_P_NODE_21183_length_281_cov_1.466346_g21080_i0 PRJNA908278 21183 281 1.466346 4.12043226 Candidatus Poseidoniaceae archaeon 2666346 Archaea Archaea 55.1 7.65e-7   NR MDP6863872.1 2666346 g21080 i0 32.9 2.71174377224199 85 55 90.7 1 12 266 66 148 MDP6863872.1 PAC2 family protein [Candidatus Poseidoniaceae archaeon] diamond 762 55.1 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Poseidoniaceae   Candidatus Poseidoniaceae archaeon
27340609 27340609 PRJNA908278_P_NODE_23103_length_270_cov_1.172589_g23000_i0 PRJNA908278 23103 270 1.172589 3.1659903 Methanoregula sp. 2052170 Archaea Archaea 54.3 4.15e-6   NR WAC05271.1 2052170 g23000 i0 51.9 4.16666666666667 54 24 57.8 1 236 81 25 78 WAC05271.1 MAG: NADP-dependent malic enzyme [Methanoregula sp.] diamond 1125 54.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
27529944 27529944 PRJNA908278_P_NODE_30483_length_247_cov_0.885057_g30380_i0 PRJNA908278 30483 247 0.885057 2.18609079 Methanosarcinaceae archaeon 1945595 Archaea Archaea 57 1.81e-7   NR HJH32543.1 1945595 g30380 i0 58.7 1.65182186234818 46 19 55.9 0 143 6 6 51 HJH32543.1 DUF2589 domain-containing protein [Methanosarcinaceae archaeon] diamond 408 57 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae   Methanosarcinaceae archaeon
27561296 27561296 PRJNA908278_P_NODE_1264_length_948_cov_2.958857_g1188_i0 PRJNA908278 1264 948 2.958857 28.04996436 Methanosaeta sp. PtaB.Bin 90426 Archaea Archaea 134 1.12e-30   NR OPX78749.1 1811685 g1188 i0 38.3 1.34177215189873 222 122 68.7 6 931 281 2067 2278 OPX78749.1 MAG: HYR domain protein [Methanosaeta sp. PtaB.Bin039] diamond 1272 134 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanosaeta sp. PtaB.Bin039
27656418 27656418 PRJNA908278_P_NODE_23084_length_270_cov_1.355330_g22981_i0 PRJNA908278 23084 270 1.35533 3.659391 Methanosphaera sp. 2666342 Archaea Archaea 82.8 4.36e-16   NR HIH36214.1 2666342 g22981 i0 52.6 0.866666666666667 78 35 84.4 1 234 7 89 166 HIH36214.1 hypothetical protein [Methanosphaera sp.] diamond 234 82.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp.
27727272 27727272 PRJNA908278_P_NODE_21564_length_279_cov_1.388350_g21461_i0 PRJNA908278 21564 279 1.38835 3.8734965 root 1 Root_unresolved Root_unresolved 42.7 0.0213   NR MCX6700790.1 2184052 g21461 i0 42.9 1.41935483870968 49 26 50.5 1 257 117 25 73 MCX6700790.1 thioredoxin family protein [Methanomicrobiales archaeon] diamond 396 43.1 0.990719257540603 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon
28129987 28129987 PRJNA908278_P_NODE_24365_length_262_cov_1.703704_g24262_i0 PRJNA908278 24365 262 1.703704 4.46370448 Methanobrevibacter sp. UBA188 1915473 Archaea Archaea 107 1.17e-24   NR WP_292883709.1 1915473 g24262 i0 65.1 0.984732824427481 86 30 98.5 0 4 261 681 766 WP_292883709.1 ThiF family adenylyltransferase, partial [Methanobrevibacter sp. UBA188] diamond 258 107 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. UBA188
28414152 28414152 PRJNA908278_P_NODE_21846_length_277_cov_2.088235_g21743_i0 PRJNA908278 21846 277 2.088235 5.78441095 Methanosarcinales archaeon 2250255 Archaea Archaea 53.9 4.65e-6   NR RYE82592.1 2250255 g21743 i0 41.1 0.790613718411552 73 35 70.4 4 79 273 149 221 RYE82592.1 MAG: hypothetical protein EOO65_05280 [Methanosarcinales archaeon] diamond 219 53.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
29234994 29234994 PRJNA908278_P_NODE_11589_length_361_cov_1.604167_g11486_i0 PRJNA908278 11589 361 1.604167 5.79104287 Thermoplasmatota archaeon 2806419 Archaea Archaea 105 1.37e-24   NR MEE2986083.1 2806419 g11486 i0 44.2 2.96675900277008 120 66 99.7 1 1 360 5 123 MEE2986083.1 NAD-dependent epimerase/dehydratase family protein [Thermoplasmatota archaeon] diamond 1071 105 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
29392981 29392981 PRJNA908278_P_NODE_5769_length_487_cov_5.594203_g5666_i0 PRJNA908278 5769 487 5.594203 27.24376861 Methanobrevibacter sp. 66852 Archaea Archaea 131 1.7299999999999998e-35   NR MEE3444538.1 66852 g5666 i0 41.3 0.985626283367556 160 93 97.9 1 483 7 3 162 MEE3444538.1 40S ribosomal protein S19 [Methanobrevibacter sp.] diamond 480 131 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29550508 29550508 PRJNA908278_P_NODE_14490_length_330_cov_1.042802_g14387_i0 PRJNA908278 14490 330 1.042802 3.4412466 Methanobrevibacter sp. UBA188 1915473 Archaea Archaea 102 1.66e-22   NR WP_292883709.1 1915473 g14387 i0 40 1 110 66 100 0 330 1 455 564 WP_292883709.1 ThiF family adenylyltransferase, partial [Methanobrevibacter sp. UBA188] diamond 330 102 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. UBA188
29581912 29581912 PRJNA908278_P_NODE_13830_length_336_cov_1.482890_g13727_i0 PRJNA908278 13830 336 1.48289 4.9825104 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 45.1 0.0162   NR MDP6328880.1 2670411 g13727 i0 48.8 2.08035714285714 41 21 36.6 0 73 195 12 52 MDP6328880.1 SAP domain-containing protein [Candidatus Thalassarchaeaceae archaeon] diamond 699 45.1 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon
30316756 30316756 PRJNA908278_P_NODE_372_length_1414_cov_3.341536_g340_i0 PRJNA908278 372 1414 3.341536 47.24931904 Methanobrevibacter 2172 Archaea Archaea 51.6 0.00824   NR WP_012955053.1 83816 g340 i0 41.5 0.271570014144272 65 35 13.8 2 62 256 57 118 WP_012955053.1 Ig-like domain repeat protein [Methanobrevibacter ruminantium] diamond 384 51.6 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter ruminantium
30435424 30435424 PRJNA908278_P_NODE_30673_length_246_cov_1.335260_g30570_i0 PRJNA908278 30673 246 1.33526 3.2847396 Methanosarcinales archaeon 2250255 Archaea Archaea 67.8 2.31e-11   NR RYE82592.1 2250255 g30570 i0 50 0.75609756097561 62 30 74.4 1 185 3 150 211 RYE82592.1 MAG: hypothetical protein EOO65_05280 [Methanosarcinales archaeon] diamond 186 67.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
30561271 30561271 PRJNA908278_P_NODE_14973_length_325_cov_1.833333_g14870_i0 PRJNA908278 14973 325 1.833333 5.95833225 Methanobrevibacter sp. 66852 Archaea Archaea 41.6 0.0302   NR MBO6105231.1 66852 g14870 i0 39.1 0.424615384615385 46 28 42.5 0 152 15 11 56 MBO6105231.1 tetratricopeptide repeat protein [Methanobrevibacter sp.] diamond 138 41.6 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
30593026 30593026 PRJNA908278_P_NODE_1993_length_784_cov_1.298172_g1902_i0 PRJNA908278 1993 784 1.298172 10.17766848 candidate division MSBL1 archaeon SCGC-AAA259I 215777 Archaea Archaea 71.6 3.24e-10   NR KXA97759.1 1698267 g1902 i0 25.3 1.39285714285714 182 126 67.7 5 784 254 185 361 KXA97759.1 elongation factor 1-alpha [candidate division MSBL1 archaeon SCGC-AAA259I09] diamond 1092 71.6 1 Archaea candidate division MSBL1 Methanobacteriati Methanobacteriota         candidate division MSBL1 archaeon SCGC-AAA259I09
31288193 31288193 PRJNA908278_P_NODE_155_length_1780_cov_9.258348_g143_i0 PRJNA908278 155 1780 9.258348 164.7985944 Methanobrevibacter sp. 66852 Archaea Archaea 123 1.01e-25   NR MEE3443986.1 66852 g143 i0 25.9 0.78876404494382 468 300 73.8 14 1763 450 3 453 MEE3443986.1 hypothetical protein [Methanobrevibacter sp.] diamond 1404 123 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31359183 31359183 PRJNA908278_P_NODE_2936_length_657_cov_2.010274_g2833_i0 PRJNA908278 2936 657 2.010274 13.20750018 Methanobrevibacter 2172 Archaea Archaea 55.1 8.99e-5   NR WP_405265535.1 66852 g2833 i0 28.9 1.67579908675799 142 79 56.6 4 439 68 1272 1409 WP_405265535.1 Ig-like domain repeat protein [Methanobrevibacter sp.] diamond 1101 55.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31952473 31952473 PRJNA908278_P_NODE_16257_length_314_cov_1.622407_g16154_i0 PRJNA908278 16257 314 1.622407 5.09435798 Methanobrevibacter sp. 66852 Archaea Archaea 58.2 3.38e-7   NR WP_407432022.1 66852 g16154 i0 48.4 2.38853503184713 62 31 58.3 1 247 65 689 750 WP_407432022.1 hypothetical protein [Methanobrevibacter sp.] diamond 750 58.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31959989 31959989 PRJNA908278_P_NODE_1737_length_833_cov_1.257895_g1653_i0 PRJNA908278 1737 833 1.257895 10.47826535 Methanobrevibacter 2172 Archaea Archaea 48.1 0.0396   NR WP_405265535.1 66852 g1653 i0 39.2 0.569027611044418 79 46 27.7 1 601 831 1328 1406 WP_405265535.1 Ig-like domain repeat protein [Methanobrevibacter sp.] diamond 474 48.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32142464 32142464 PRJNA908278_P_NODE_13838_length_336_cov_1.403042_g13735_i0 PRJNA908278 13838 336 1.403042 4.71422112 Haloprofundus sp. MHR1 2572921 Archaea Archaea 60.5 5.77e-8   NR WP_137048893.1 2572921 g13735 i0 43.5 1.625 85 45 75.9 2 80 334 256 337 WP_137048893.1 ferritin-like domain-containing protein [Haloprofundus sp. MHR1] diamond 546 60.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloprofundus Haloprofundus sp. MHR1
32276667 32276667 PRJNA908278_P_NODE_25118_length_258_cov_1.432432_g25015_i0 PRJNA908278 25118 258 1.432432 3.69567456 root 1 Root_unresolved Root_unresolved 114 1.02e-27   NR WP_012940666.1 84156 g25015 i0 67.1 12.6162790697674 85 28 98.8 0 1 255 3 87 WP_012940666.1 RuvB-like helicase [Archaeoglobus profundus] diamond 3255 115 0.991304347826087 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae Archaeoglobus Archaeoglobus profundus
32616776 32616776 PRJNA908278_P_NODE_1100_length_994_cov_5.246471_g1034_i0 PRJNA908278 1100 994 5.246471 52.14992174 Methanobrevibacter sp. 66852 Archaea Archaea 233 1.3e-70   NR WP_292806969.1 66852 g1034 i0 39.5 1.00804828973843 334 185 96.3 4 3 959 11 342 WP_292806969.1 WD40 repeat domain-containing protein [Methanobrevibacter sp.] diamond 1002 233 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32781484 32781484 PRJNA908278_P_NODE_32280_length_245_cov_0.895349_g32177_i0 PRJNA908278 32280 245 0.895349 2.19360505 root 1 Root_unresolved Root_unresolved 47.4 9.16e-4   NR MCK5309863.1 1906666 g32177 i0 48.3 3.63673469387755 60 22 62.4 2 197 45 157 216 MCK5309863.1 FG-GAP repeat protein [Thermoplasmata archaeon] diamond 891 47.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;