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contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA908278" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 14 ✖

bioproject 1

  • PRJNA908278 · 14 ✖

analysis 1

  • diamond · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
890439 890439 PRJNA908278_P_NODE_61_length_2445_cov_4.557336_g51_i0 PRJNA908278 61 2445 4.557336 111.4268652 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 1105 0   NR WP_295614768.1 253161 g51 i0 66.5 1.97914110429448 805 269 98.7 1 2414 3 1 805 WP_295614768.1 GTP-binding protein [uncultured Methanobrevibacter sp.] diamond 4839 1105 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
26739061 26739061 PRJNA908278_P_NODE_29681_length_247_cov_3.097701_g29578_i0 PRJNA908278 29681 247 3.097701 7.65132147 Methanobrevibacter arboriphilus 39441 Archaea Archaea 62.4 4.83e-9   NR WP_158082511.1 39441 g29578 i0 41.5 4.16599190283401 65 35 78.9 1 32 226 38 99 WP_158082511.1 Ig-like domain repeat protein [Methanobrevibacter arboriphilus] diamond 1029 62.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter arboriphilus
26866430 26866430 PRJNA908278_P_NODE_4621_length_538_cov_1.324731_g4518_i0 PRJNA908278 4621 538 1.324731 7.12705278 Methanobrevibacter sp. 66852 Archaea Archaea 50.4 0.00113   NR MEE3491292.1 66852 g4518 i0 28.7 0.602230483271376 108 75 59.7 2 522 202 24 130 MEE3491292.1 hypothetical protein [Methanobrevibacter sp.] diamond 324 50.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
27656418 27656418 PRJNA908278_P_NODE_23084_length_270_cov_1.355330_g22981_i0 PRJNA908278 23084 270 1.35533 3.659391 Methanosphaera sp. 2666342 Archaea Archaea 82.8 4.36e-16   NR HIH36214.1 2666342 g22981 i0 52.6 0.866666666666667 78 35 84.4 1 234 7 89 166 HIH36214.1 hypothetical protein [Methanosphaera sp.] diamond 234 82.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp.
28129987 28129987 PRJNA908278_P_NODE_24365_length_262_cov_1.703704_g24262_i0 PRJNA908278 24365 262 1.703704 4.46370448 Methanobrevibacter sp. UBA188 1915473 Archaea Archaea 107 1.17e-24   NR WP_292883709.1 1915473 g24262 i0 65.1 0.984732824427481 86 30 98.5 0 4 261 681 766 WP_292883709.1 ThiF family adenylyltransferase, partial [Methanobrevibacter sp. UBA188] diamond 258 107 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. UBA188
29392981 29392981 PRJNA908278_P_NODE_5769_length_487_cov_5.594203_g5666_i0 PRJNA908278 5769 487 5.594203 27.24376861 Methanobrevibacter sp. 66852 Archaea Archaea 131 1.7299999999999998e-35   NR MEE3444538.1 66852 g5666 i0 41.3 0.985626283367556 160 93 97.9 1 483 7 3 162 MEE3444538.1 40S ribosomal protein S19 [Methanobrevibacter sp.] diamond 480 131 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29550508 29550508 PRJNA908278_P_NODE_14490_length_330_cov_1.042802_g14387_i0 PRJNA908278 14490 330 1.042802 3.4412466 Methanobrevibacter sp. UBA188 1915473 Archaea Archaea 102 1.66e-22   NR WP_292883709.1 1915473 g14387 i0 40 1 110 66 100 0 330 1 455 564 WP_292883709.1 ThiF family adenylyltransferase, partial [Methanobrevibacter sp. UBA188] diamond 330 102 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. UBA188
30316756 30316756 PRJNA908278_P_NODE_372_length_1414_cov_3.341536_g340_i0 PRJNA908278 372 1414 3.341536 47.24931904 Methanobrevibacter 2172 Archaea Archaea 51.6 0.00824   NR WP_012955053.1 83816 g340 i0 41.5 0.271570014144272 65 35 13.8 2 62 256 57 118 WP_012955053.1 Ig-like domain repeat protein [Methanobrevibacter ruminantium] diamond 384 51.6 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter ruminantium
30561271 30561271 PRJNA908278_P_NODE_14973_length_325_cov_1.833333_g14870_i0 PRJNA908278 14973 325 1.833333 5.95833225 Methanobrevibacter sp. 66852 Archaea Archaea 41.6 0.0302   NR MBO6105231.1 66852 g14870 i0 39.1 0.424615384615385 46 28 42.5 0 152 15 11 56 MBO6105231.1 tetratricopeptide repeat protein [Methanobrevibacter sp.] diamond 138 41.6 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31288193 31288193 PRJNA908278_P_NODE_155_length_1780_cov_9.258348_g143_i0 PRJNA908278 155 1780 9.258348 164.7985944 Methanobrevibacter sp. 66852 Archaea Archaea 123 1.01e-25   NR MEE3443986.1 66852 g143 i0 25.9 0.78876404494382 468 300 73.8 14 1763 450 3 453 MEE3443986.1 hypothetical protein [Methanobrevibacter sp.] diamond 1404 123 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31359183 31359183 PRJNA908278_P_NODE_2936_length_657_cov_2.010274_g2833_i0 PRJNA908278 2936 657 2.010274 13.20750018 Methanobrevibacter 2172 Archaea Archaea 55.1 8.99e-5   NR WP_405265535.1 66852 g2833 i0 28.9 1.67579908675799 142 79 56.6 4 439 68 1272 1409 WP_405265535.1 Ig-like domain repeat protein [Methanobrevibacter sp.] diamond 1101 55.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31952473 31952473 PRJNA908278_P_NODE_16257_length_314_cov_1.622407_g16154_i0 PRJNA908278 16257 314 1.622407 5.09435798 Methanobrevibacter sp. 66852 Archaea Archaea 58.2 3.38e-7   NR WP_407432022.1 66852 g16154 i0 48.4 2.38853503184713 62 31 58.3 1 247 65 689 750 WP_407432022.1 hypothetical protein [Methanobrevibacter sp.] diamond 750 58.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31959989 31959989 PRJNA908278_P_NODE_1737_length_833_cov_1.257895_g1653_i0 PRJNA908278 1737 833 1.257895 10.47826535 Methanobrevibacter 2172 Archaea Archaea 48.1 0.0396   NR WP_405265535.1 66852 g1653 i0 39.2 0.569027611044418 79 46 27.7 1 601 831 1328 1406 WP_405265535.1 Ig-like domain repeat protein [Methanobrevibacter sp.] diamond 474 48.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32616776 32616776 PRJNA908278_P_NODE_1100_length_994_cov_5.246471_g1034_i0 PRJNA908278 1100 994 5.246471 52.14992174 Methanobrevibacter sp. 66852 Archaea Archaea 233 1.3e-70   NR WP_292806969.1 66852 g1034 i0 39.5 1.00804828973843 334 185 96.3 4 3 959 11 342 WP_292806969.1 WD40 repeat domain-containing protein [Methanobrevibacter sp.] diamond 1002 233 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;