RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA906294" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Annelida · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA906294 · 16 ✖

analysis 1

  • diamond · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11093591 11093591 PRJNA906294_P_NODE_94789_length_433_cov_0.841667_g90675_i0 PRJNA906294 94789 433 0.841667 3.64441811 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 136 4.36e-34   NR KAK2161943.1 53620 g90675 i0 57.6 5.00923787528868 144 56 98.4 3 428 3 706 846 KAK2161943.1 hypothetical protein LSH36_107g04046 [Paralvinella palmiformis] diamond 2169 137 0.992700729927007 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
14915135 14915135 PRJNA906294_P_NODE_180692_length_275_cov_0.940594_g176576_i0 PRJNA906294 180692 275 0.940594 2.5866335 Metazoa 33208 Annelida Annelida 124 8.549999999999999e-31   NR CAH1779871.1 6347 g176576 i0 66.7 3.89454545454545 90 30 98.2 0 3 272 337 426 CAH1779871.1 unnamed protein product [Owenia fusiformis] diamond 1071 124 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
26866365 26866365 PRJNA906294_P_NODE_189141_length_266_cov_1.466321_g185025_i0 PRJNA906294 189141 266 1.466321 3.90041386 Capitella teleta 283909 Annelida Annelida 125 1.0699999999999999e-31   NR ELT99108.1 283909 g185025 i0 68.2 20.3571428571429 88 28 99.2 0 1 264 329 416 ELT99108.1 hypothetical protein CAPTEDRAFT_20550 [Capitella teleta] diamond 5415 125 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta
26992457 26992457 PRJNA906294_P_NODE_206622_length_249_cov_1.750000_g202506_i0 PRJNA906294 206622 249 1.75 4.3575 Owenia fusiformis 6347 Annelida Annelida 64.3 6.67e-11   NR CAH1781962.1 6347 g202506 i0 43.4 0.91566265060241 76 39 86.7 1 243 28 50 125 CAH1781962.1 unnamed protein product [Owenia fusiformis] diamond 228 64.3 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
27719820 27719820 PRJNA906294_P_NODE_189384_length_266_cov_1.181347_g185268_i0 PRJNA906294 189384 266 1.181347 3.14238302 Owenia fusiformis 6347 Annelida Annelida 74.3 3.78e-13   NR CAH1786227.1 6347 g185268 i0 41.4 0.981203007518797 87 47 98.1 2 1 261 240 322 CAH1786227.1 unnamed protein product [Owenia fusiformis] diamond 261 74.3 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
27877177 27877177 PRJNA906294_P_NODE_148085_length_314_cov_1.825726_g143969_i0 PRJNA906294 148085 314 1.825726 5.73277964 Dimorphilus gyrociliatus 2664684 Annelida Annelida 43.1 0.0166   NR CAD5114746.1 2664684 g143969 i0 42.6 0.582802547770701 61 33 56.4 1 201 25 43 103 CAD5114746.1 DgyrCDS3786 [Dimorphilus gyrociliatus] diamond 183 43.1 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Dinophilidae Dimorphilus Dimorphilus gyrociliatus
28074067 28074067 PRJNA906294_P_NODE_113165_length_379_cov_1.532680_g109050_i0 PRJNA906294 113165 379 1.53268 5.8088572 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 144 8.84e-39   NR P49165.1 6431 g109050 i0 55.2 5.89709762532982 125 53 98.2 2 1 372 143 265 P49165.1 RecName: Full=Large ribosomal subunit protein uL4; AltName: Full=60S ribosomal protein L4; AltName: Full=L1 [Urechis caupo] diamond 2235 145 0.993103448275862 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Xenopneusta Urechidae Urechis Urechis caupo
28887460 28887460 PRJNA906294_P_NODE_169028_length_287_cov_1.995327_g164912_i0 PRJNA906294 169028 287 1.995327 5.72658849 Owenia fusiformis 6347 Annelida Annelida 88.2 5.13e-18   NR CAH1776161.1 6347 g164912 i0 47.3 3.90940766550523 93 47 95.1 1 287 15 312 404 CAH1776161.1 unnamed protein product [Owenia fusiformis] diamond 1122 88.2 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
29273806 29273806 PRJNA906294_P_NODE_158469_length_300_cov_1.339207_g154353_i0 PRJNA906294 158469 300 1.339207 4.017621 Metazoa 33208 Annelida Annelida 57 5.85e-7   NR CAH1796391.1 6347 g154353 i0 44.4 3.88 54 30 54 0 107 268 228 281 CAH1796391.1 unnamed protein product, partial [Owenia fusiformis] diamond 1164 57.4 0.993031358885017 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
29329606 29329606 PRJNA906294_P_NODE_216749_length_246_cov_0.878613_g212633_i0 PRJNA906294 216749 246 0.878613 2.16138798 Paralvinella palmiformis 53620 Annelida Annelida 44.3 0.0105   NR KAK2148997.1 53620 g212633 i0 36.4 0.670731707317073 55 33 64.6 1 244 86 212 266 KAK2148997.1 hypothetical protein LSH36_472g02056 [Paralvinella palmiformis] diamond 165 44.3 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
29708069 29708069 PRJNA906294_P_NODE_125450_length_352_cov_1.569892_g121334_i0 PRJNA906294 125450 352 1.569892 5.52601984 Capitella teleta 283909 Annelida Annelida 95.5 3.64e-20   NR ELU09171.1 283909 g121334 i0 56.3 2.19886363636364 80 33 68.2 1 7 246 380 457 ELU09171.1 hypothetical protein CAPTEDRAFT_202784 [Capitella teleta] diamond 774 95.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta
29905659 29905659 PRJNA906294_P_NODE_90391_length_448_cov_9.421333_g86277_i0 PRJNA906294 90391 448 9.421333 42.20757184 Metazoa 33208 Annelida Annelida 134 5.0699999999999995e-37   NR ABW23180.1 6344 g86277 i0 52.6 39.3549107142857 135 63 89.7 1 412 11 4 138 ABW23180.1 ribosomal protein rpl26 [Arenicola marina] diamond 17631 134 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Arenicolidae Arenicola Arenicola marina
30505844 30505844 PRJNA906294_P_NODE_181273_length_274_cov_1.353234_g177157_i0 PRJNA906294 181273 274 1.353234 3.70786116 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 85.9 3.06e-17   NR CAH1801246.1 6347 g177157 i0 51.9 4.22627737226277 79 33 83.2 2 228 1 37 113 CAH1801246.1 unnamed protein product [Owenia fusiformis] diamond 1158 86.7 0.990772779700115 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
31643507 31643507 PRJNA906294_P_NODE_104656_length_401_cov_2.689024_g100541_i0 PRJNA906294 104656 401 2.689024 10.78298624 Metazoa 33208 Annelida Annelida 62.4 2.64e-8   NR XP_009029427.1 6412 g100541 i0 39.5 1.85536159600997 81 46 59.1 2 145 381 346 425 XP_009029427.1 hypothetical protein HELRODRAFT_194214 [Helobdella robusta] diamond 744 62.8 0.993630573248408 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
31984035 31984035 PRJNA906294_P_NODE_151358_length_310_cov_0.940928_g147242_i0 PRJNA906294 151358 310 0.940928 2.9168768 Capitella teleta 283909 Annelida Annelida 60.8 1.64e-8   NR ELT98800.1 283909 g147242 i0 37.8 0.716129032258065 74 46 71.6 0 3 224 84 157 ELT98800.1 hypothetical protein CAPTEDRAFT_46330, partial [Capitella teleta] diamond 222 60.8 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta
32490613 32490613 PRJNA906294_P_NODE_231419_length_241_cov_0.904762_g227303_i0 PRJNA906294 231419 241 0.904762 2.18047642 Capitella teleta 283909 Annelida Annelida 79.7 2.67e-16   NR ELU08978.1 283909 g227303 i0 51.9 1.96680497925311 79 29 98.3 1 1 237 78 147 ELU08978.1 hypothetical protein CAPTEDRAFT_182533 [Capitella teleta] diamond 474 79.7 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;