RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

19 rows where analysis = "diamond", bioproject = "PRJNA904835" and tax_phylum = "Bacteroidota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 19 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA904835 · 19 ✖

analysis 1

  • diamond · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
883016 883016 PRJNA904835_P_NODE_32681_length_341_cov_0.850746_g32425_i0 PRJNA904835 32681 341 0.850746 2.90104386 Flavobacterium sp. 239 Bacteria Bacteria 213 3.7499999999999996e-68   NR MPT35378.1 239 g32425 i0 100 1.77712609970674 101 0 88.9 0 339 37 100 200 MPT35378.1 asparagine synthetase B [Flavobacterium sp.] diamond 606 213 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
14911474 14911474 PRJNA904835_P_NODE_51052_length_251_cov_0.865169_g50796_i0 PRJNA904835 51052 251 0.865169 2.17157419 root 1 Root_unresolved Root_unresolved 121 2.51e-30   NR MCY7420976.1 1869212 g50796 i0 67.9 5.80876494023904 81 26 96.8 0 244 2 402 482 MCY7420976.1 NAD-dependent succinate-semialdehyde dehydrogenase [Chitinophagaceae bacterium] diamond 1458 121 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
27221227 27221227 PRJNA904835_P_NODE_52982_length_248_cov_1.137143_g52726_i0 PRJNA904835 52982 248 1.137143 2.82011464 Mucilaginibacter 423349 Bacteria Bacteria 86.3 1.9e-17   NR HEY2583270.1 1882438 g52726 i0 52.4 2.98790322580645 82 35 94.4 1 236 3 424 505 HEY2583270.1 glycosyl hydrolase family 28-related protein [Mucilaginibacter sp.] diamond 741 86.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Mucilaginibacter Mucilaginibacter sp.
27372278 27372278 PRJNA904835_P_NODE_35243_length_325_cov_1.912698_g34987_i0 PRJNA904835 35243 325 1.912698 6.2162685 unclassified Dysgonomonas 2630389 Bacteria Bacteria 43.9 0.0343   NR WP_280644237.1 2630389 g34987 i0 36.5 0.581538461538462 63 36 54.5 1 179 3 58 120 WP_280644237.1 MULTISPECIES: M24 family metallopeptidase [unclassified Dysgonomonas] diamond 189 43.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Dysgonomonadaceae Dysgonomonas  
27751094 27751094 PRJNA904835_P_NODE_38624_length_307_cov_0.974359_g38368_i0 PRJNA904835 38624 307 0.974359 2.99128213 Chitinophagales bacterium 2448779 Bacteria Bacteria 43.5 0.0422   NR MBC8047264.1 2448779 g38368 i0 33.8 0.693811074918567 71 45 67.4 1 15 221 287 357 MBC8047264.1 hypothetical protein [Chitinophagales bacterium] diamond 213 43.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales     Chitinophagales bacterium
28358166 28358166 PRJNA904835_P_NODE_26686_length_383_cov_1.712903_g26430_i0 PRJNA904835 26686 383 1.712903 6.56041849 Pseudomonadati 3379134 Bacteria Bacteria 115 1.3100000000000002e-27   NR PKP39489.1 2013683 g26430 i0 54 8.10704960835509 113 51 87.7 1 374 39 19 131 PKP39489.1 MAG: deoxyguanosinetriphosphate triphosphohydrolase [Bacteroidetes bacterium HGW-Bacteroidetes-15] diamond 3105 115 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidetes bacterium HGW-Bacteroidetes-15
28445622 28445622 PRJNA904835_P_NODE_31706_length_347_cov_1.124088_g31450_i0 PRJNA904835 31706 347 1.124088 3.90058536 Cellulophaga sp. BC115SP 2683263 Bacteria Bacteria 242 2.3e-76   NR WP_166551284.1 2683263 g31450 i0 100 0.994236311239193 115 0 99.4 0 346 2 133 247 WP_166551284.1 vanadium-dependent haloperoxidase [Cellulophaga sp. BC115SP] diamond 345 242 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Cellulophaga Cellulophaga sp. BC115SP
28698276 28698276 PRJNA904835_P_NODE_37867_length_311_cov_1.235294_g37611_i0 PRJNA904835 37867 311 1.235294 3.84176434 Flectobacillus sp. BAB-3569 1509483 Bacteria Bacteria 201 2.7400000000000003e-64   NR WP_095163503.1 1509483 g37611 i0 98.1 0.993569131832797 103 2 99.4 0 3 311 29 131 WP_095163503.1 hypothetical protein [Flectobacillus sp. BAB-3569] diamond 309 201 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flectobacillaceae Flectobacillus Flectobacillus sp. BAB-3569
28918922 28918922 PRJNA904835_P_NODE_55048_length_246_cov_0.890173_g54792_i0 PRJNA904835 55048 246 0.890173 2.18982558 Cyclobacteriaceae bacterium 2099675 Bacteria Bacteria 42 0.0484   NR MEX2511452.1 2099675 g54792 i0 35.4 0.585365853658537 48 31 58.5 0 166 23 110 157 MEX2511452.1 shikimate kinase [Cyclobacteriaceae bacterium] diamond 144 42 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cyclobacteriaceae   Cyclobacteriaceae bacterium
29077122 29077122 PRJNA904835_P_NODE_49008_length_257_cov_1.673913_g48752_i0 PRJNA904835 49008 257 1.673913 4.30195641 uncultured Algibacter sp. 298659 Bacteria Bacteria 43.9 0.0175   NR WP_298556281.1 298659 g48752 i0 31.3 0.968871595330739 83 54 96.9 1 255 7 81 160 WP_298556281.1 exopolysaccharide transport family protein [uncultured Algibacter sp.] diamond 249 43.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Algibacter uncultured Algibacter sp.
29866368 29866368 PRJNA904835_P_NODE_29311_length_363_cov_3.062069_g29055_i0 PRJNA904835 29311 363 3.062069 11.11531047 Bacteroidota bacterium 1898104 Bacteria Bacteria 45.1 0.0222   NR MFM7684286.1 1898104 g29055 i0 32.9 1.46280991735537 82 50 65.3 3 358 122 580 659 MFM7684286.1 DUF4116 domain-containing protein [Bacteroidota bacterium] diamond 531 45.1 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
30087415 30087415 PRJNA904835_P_NODE_58972_length_241_cov_0.916667_g58716_i0 PRJNA904835 58972 241 0.916667 2.20916747 Flectobacillus longus 2984207 Bacteria Bacteria 147 1.85e-40   NR WP_283329611.1 2984207 g58716 i0 94.9 0.983402489626556 79 4 98.3 0 3 239 11 89 WP_283329611.1 MFS transporter [Flectobacillus longus] diamond 237 147 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flectobacillaceae Flectobacillus Flectobacillus longus
30656123 30656123 PRJNA904835_P_NODE_14753_length_541_cov_1.576923_g14501_i0 PRJNA904835 14753 541 1.576923 8.53115343 Thermoflexibacter sp. 1938004 Bacteria Bacteria 187 2.4499999999999997e-57   NR MCU0392935.1 1938004 g14501 i0 56.2 0.898336414048059 162 59 89.3 4 22 504 2 152 MCU0392935.1 GNAT family N-acetyltransferase [Thermoflexibacter sp.] diamond 486 187 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Thermoflexibacteraceae Thermoflexibacter Thermoflexibacter sp.
30972279 30972279 PRJNA904835_P_NODE_57174_length_243_cov_0.905882_g56918_i0 PRJNA904835 57174 243 0.905882 2.20129326 Flectobacillus 101 Bacteria Bacteria 162 6.26e-49   NR WP_310586454.1 101 g56918 i0 100 0.987654320987654 80 0 98.8 0 242 3 49 128 WP_310586454.1 MULTISPECIES: RNA polymerase sigma factor [Flectobacillus] diamond 240 162 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flectobacillaceae Flectobacillus  
31636069 31636069 PRJNA904835_P_NODE_46256_length_270_cov_1.563452_g46000_i0 PRJNA904835 46256 270 1.563452 4.2213204 Bacteroidota 976 Bacteria Bacteria 175 5.93e-53   NR WP_166553253.1 976 g46000 i0 100 0.944444444444444 85 0 94.4 0 256 2 83 167 WP_166553253.1 MULTISPECIES: tetratricopeptide repeat protein [Bacteroidota] diamond 255 175 1 Bacteria FCB group Pseudomonadati Bacteroidota          
31699417 31699417 PRJNA904835_P_NODE_31997_length_345_cov_1.132353_g31741_i0 PRJNA904835 31997 345 1.132353 3.90661785 Chitinophagia bacterium 2448778 Bacteria Bacteria 46.2 0.00733   NR MEI6190480.1 2448778 g31741 i0 35.2 0.91304347826087 105 62 91.3 2 1 315 80 178 MEI6190480.1 NHL repeat-containing protein [Chitinophagia bacterium] diamond 315 46.2 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia       Chitinophagia bacterium
32300859 32300859 PRJNA904835_P_NODE_41579_length_292_cov_1.050228_g41323_i0 PRJNA904835 41579 292 1.050228 3.06666576 Flavobacterium supellecticarium 2565924 Bacteria Bacteria 193 2.21e-58   NR WP_136401850.1 2565924 g41323 i0 99 0.996575342465753 97 1 99.7 0 292 2 95 191 WP_136401850.1 radical SAM protein [Flavobacterium supellecticarium] diamond 291 193 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium supellecticarium
32427112 32427112 PRJNA904835_P_NODE_55319_length_245_cov_1.691860_g55063_i0 PRJNA904835 55319 245 1.69186 4.145057 Runella limosa 370978 Bacteria Bacteria 129 1.88e-34   NR WP_028525191.1 370978 g55063 i0 73.8 0.979591836734694 80 21 98 0 6 245 145 224 WP_028525191.1 nucleotide kinase domain-containing protein [Runella limosa] diamond 240 129 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Spirosomataceae Runella Runella limosa
32679376 32679376 PRJNA904835_P_NODE_56280_length_244_cov_1.198830_g56024_i0 PRJNA904835 56280 244 1.19883 2.9251452 Ornithobacterium rhinotracheale 28251 Bacteria Bacteria 43.1 0.0275   NR WP_243910104.1 28251 g56024 i0 41.4 1.38934426229508 58 33 71.3 1 221 48 974 1030 WP_243910104.1 fibronectin type III domain-containing protein [Ornithobacterium rhinotracheale] diamond 339 43.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Ornithobacterium Ornithobacterium rhinotracheale

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;