RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA902848" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA902848 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22558876 22558876 PRJNA902848_P_NODE_17838_length_246_cov_0.901734_g17788_i0 PRJNA902848 17838 246 0.901734 2.21826564 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 90.1 6.97e-19   NR XP_052765036.1 6604 g17788 i0 57 3.59756097560976 79 29 96.3 1 240 4 97 170 XP_052765036.1 uncharacterized protein LOC128206531 isoform X1 [Mya arenaria] diamond 885 90.9 0.991199119911991 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
29045488 29045488 PRJNA902848_P_NODE_10548_length_278_cov_1.995122_g10498_i0 PRJNA902848 10548 278 1.995122 5.54643916 Mactra antiquata 2302425 Mollusca Mollusca 43.5 0.00961   NR KAL4219916.1 2302425 g10498 i0 31.9 1.96402877697842 91 57 93.9 2 272 12 10 99 KAL4219916.1 hypothetical protein ACF0H5_020328 [Mactra antiquata] diamond 546 43.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Mactridae Mactra Mactra antiquata
29771408 29771408 PRJNA902848_P_NODE_13251_length_253_cov_0.866667_g13201_i0 PRJNA902848 13251 253 0.866667 2.19266751 Gigantopelta aegis 1735272 Mollusca Mollusca 115 7.54e-28   NR XP_041354624.1 1735272 g13201 i0 63.1 0.99604743083004 84 31 99.6 0 253 2 161 244 XP_041354624.1 nuclear fragile X mental retardation-interacting protein 1-like [Gigantopelta aegis] diamond 252 115 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
30442737 30442737 PRJNA902848_P_NODE_10013_length_285_cov_1.103774_g9963_i0 PRJNA902848 10013 285 1.103774 3.1457559 Metazoa 33208 Mollusca Mollusca 175 9.33e-53   NR XP_065923949.1 29159 g9963 i0 89.5 194.157894736842 95 10 100 0 285 1 43 137 XP_065923949.1 ras-related protein Rab-8A isoform X1 [Magallana gigas] diamond 55335 176 0.994318181818182 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
31699392 31699392 PRJNA902848_P_NODE_14657_length_251_cov_0.876404_g14607_i0 PRJNA902848 14657 251 0.876404 2.19977404 Elysia chlorotica 188477 Mollusca Mollusca 75.9 8.69e-14   NR RUS78787.1 188477 g14607 i0 42.2 0.99203187250996006 83 44 99.2 1 1 249 181 259 RUS78787.1 hypothetical protein EGW08_013437 [Elysia chlorotica] diamond 249 75.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia chlorotica
32427083 32427083 PRJNA902848_P_NODE_9319_length_293_cov_1.063636_g9269_i0 PRJNA902848 9319 293 1.063636 3.11645348 Gigantopelta aegis 1735272 Mollusca Mollusca 111 5.71e-26   NR XP_041351713.1 1735272 g9269 i0 54.2 0.982935153583618 96 43 98.3 1 4 291 227 321 XP_041351713.1 uncharacterized protein LOC121370501 [Gigantopelta aegis] diamond 288 111 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;