RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA902848" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 1 ✖

bioproject 1

  • PRJNA902848 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27877108 27877108 PRJNA902848_P_NODE_6365_length_340_cov_1.749064_g6315_i0 PRJNA902848 6365 340 1.749064 5.9468176 Zebrafish influenza B-like virus RQ01 Viruses Viruses 145 2.8e-38   NR AVM87624.1 RQ01 g6315 i0 64.6 0.997058823529412 113 40 99.7 0 339 1 452 564 AVM87624.1 hemagglutinin, partial [Wuhan spiny eel influenza virus] diamond 339 145 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae   Zebrafish influenza B-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;