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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA902515" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJNA902515 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7259336 7259336 PRJNA902515_P_NODE_15066_length_244_cov_0.912281_g15043_i0 PRJNA902515 15066 244 0.912281 2.22596564 Myxococcales bacterium 2026763 Bacteria Bacteria 159 1.04e-45   NR MBK8997310.1 2026763 g15043 i0 98.8 0.983606557377049 80 1 98.4 0 3 242 114 193 MBK8997310.1 ketoacyl-ACP synthase III [Myxococcales bacterium] diamond 240 159 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
13634850 13634850 PRJNA902515_P_NODE_11091_length_253_cov_0.866667_g11068_i0 PRJNA902515 11091 253 0.866667 2.19266751 Archangium 47 Bacteria Bacteria 129 6.38e-33   NR HEY1088277.1 1872627 g11068 i0 77.4 4.9802371541502 84 19 99.6 0 252 1 105 188 HEY1088277.1 long-chain fatty acid--CoA ligase [Archangium sp.] diamond 1260 129 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
18732620 18732620 PRJNA902515_P_NODE_12455_length_250_cov_0.881356_g12432_i0 PRJNA902515 12455 250 0.881356 2.20339 Archangium sp. 1872627 Bacteria Bacteria 144 5.879999999999999e-38   NR HEY1088374.1 1872627 g12432 i0 83.1 1.992 83 14 99.6 0 1 249 280 362 HEY1088374.1 polyribonucleotide nucleotidyltransferase [Archangium sp.] diamond 498 144 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
22558066 22558066 PRJNA902515_P_NODE_12358_length_250_cov_0.881356_g12335_i0 PRJNA902515 12358 250 0.881356 2.20339 Polyangiaceae bacterium 2268199 Bacteria Bacteria 157 1.52e-42   NR MBE7482697.1 2268199 g12335 i0 100 0.996 83 0 99.6 0 249 1 719 801 MBE7482697.1 glycosyltransferase family 39 protein [Polyangiaceae bacterium] diamond 249 157 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
28635156 28635156 PRJNA902515_P_NODE_7907_length_292_cov_1.415525_g7884_i0 PRJNA902515 7907 292 1.415525 4.133333 Archangium sp. 1872627 Bacteria Bacteria 198 2.5e-60   NR HEY1088621.1 1872627 g7884 i0 90.7 1.99315068493151 97 9 99.7 0 2 292 126 222 HEY1088621.1 VOC family protein [Archangium sp.] diamond 582 198 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
28982421 28982421 PRJNA902515_P_NODE_12408_length_250_cov_0.881356_g12385_i0 PRJNA902515 12408 250 0.881356 2.20339 Sorangiineae bacterium PRO1 2293716 Bacteria Bacteria 166 7.85e-50   NR MCE7893686.1 2293716 g12385 i0 100 1.992 83 0 99.6 0 2 250 109 191 MCE7893686.1 hypothetical protein [Sorangiineae bacterium PRO1] diamond 498 166 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Sorangiineae bacterium PRO1
31454026 31454026 PRJNA902515_P_NODE_14836_length_245_cov_0.906977_g14813_i0 PRJNA902515 14836 245 0.906977 2.22209365 Myxococcia 32015 Bacteria Bacteria 119 3.3800000000000003e-29   NR MBK8994214.1 2026763 g14813 i0 100 1.39591836734694 57 0 69.8 0 245 75 547 603 MBK8994214.1 hypothetical protein [Myxococcales bacterium] diamond 342 119 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32054861 32054861 PRJNA902515_P_NODE_10938_length_254_cov_1.353591_g10915_i0 PRJNA902515 10938 254 1.353591 3.43812114 Myxococcia 32015 Bacteria Bacteria 163 7.7e-45   NR MBE7483573.1 2268199 g10915 i0 98.8 1.98425196850394 84 1 99.2 0 254 3 513 596 MBE7483573.1 protein kinase [Polyangiaceae bacterium] diamond 504 163 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32268997 32268997 PRJNA902515_P_NODE_13338_length_248_cov_0.891429_g13315_i0 PRJNA902515 13338 248 0.891429 2.21074392 Polyangiaceae bacterium 2268199 Bacteria Bacteria 62.8 3.35e-9   NR HEX6271431.1 2268199 g13315 i0 40 0.967741935483871 80 41 96.8 1 247 8 370 442 HEX6271431.1 hypothetical protein [Polyangiaceae bacterium] diamond 240 62.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32679328 32679328 PRJNA902515_P_NODE_15960_length_242_cov_0.923077_g15937_i0 PRJNA902515 15960 242 0.923077 2.23384634 Labilithrix sp. 1971228 Bacteria Bacteria 74.3 2.68e-13   NR MBX3227896.1 1971228 g15937 i0 51.8 1.02892561983471 83 36 99.2 2 241 2 38 119 MBX3227896.1 mechanosensitive ion channel family protein [Labilithrix sp.] diamond 249 74.3 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
32805491 32805491 PRJNA902515_P_NODE_13720_length_247_cov_0.896552_g13697_i0 PRJNA902515 13720 247 0.896552 2.21448344 Myxococcales bacterium 2026763 Bacteria Bacteria 115 2.2e-29   NR MSP25349.1 2026763 g13697 i0 67.9 0.983805668016194 81 26 98.4 0 245 3 74 154 MSP25349.1 hypothetical protein [Myxococcales bacterium] diamond 243 115 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;