RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA902515" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA902515 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29992721 29992721 PRJNA902515_P_NODE_9591_length_270_cov_0.984772_g9568_i0 PRJNA902515 9591 270 0.984772 2.6588844 Bicyclus anynana 110368 Arthropoda Arthropoda 102 4.309999999999999e-23   NR XP_052746909.1 110368 g9568 i0 96.4 212.055555555556 55 2 61.1 0 63 227 40 94 XP_052746909.1 LOW QUALITY PROTEIN: cytochrome c oxidase subunit 1-like [Bicyclus anynana] diamond 57255 103 0.990291262135922 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Lepidoptera Nymphalidae Bicyclus Bicyclus anynana
30182144 30182144 PRJNA902515_P_NODE_5792_length_328_cov_0.917647_g5769_i0 PRJNA902515 5792 328 0.917647 3.00988216 Microplitis mediator 375433 Arthropoda Arthropoda 135 4.71e-38   NR XP_057334168.1 375433 g5769 i0 59.6 1.8109756097561 99 40 90.5 0 327 31 74 172 XP_057334168.1 uncharacterized protein LOC130673229 isoform X2 [Microplitis mediator] diamond 594 135 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hymenoptera Braconidae Microplitis Microplitis mediator

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;