RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA900999" and tax_superkingdom = "Viruses"

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tax_kingdom 2

tax_superkingdom 1

  • Viruses · 7 ✖

bioproject 1

  • PRJNA900999 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27688041 27688041 PRJNA900999_S_NODE_6964_length_172_cov_3.643357_g6908_i0 PRJNA900999 6964 172 3.643357 6.26657404 Caudoviricetes sp. 2832643 Viruses Viruses 81.6 3.05e-18   NR DAT88054.1 2832643 g6908 i0 77.8 0.784883720930233 45 10 78.5 0 169 35 72 116 DAT88054.1 MAG TPA: protein of unknown function (DUF4318) [Caudoviricetes sp.] diamond 135 81.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28200221 28200221 PRJNA900999_S_NODE_2846_length_242_cov_7.835681_g2790_i0 PRJNA900999 2846 242 7.835681 18.96234802 Viruses 10239 Viruses Viruses 44.7 0.00772   NR UYL95439.1 2972060 g2790 i0 43.8 1.84710743801653 73 37 88 3 20 232 617 687 UYL95439.1 MAG: RNA-dependent RNA polymerase [Tongren Botou tick virus 1] diamond 447 44.7 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Tongren Botou tick virus 1
28295103 28295103 PRJNA900999_S_NODE_6246_length_180_cov_2.483444_g6190_i0 PRJNA900999 6246 180 2.483444 4.4701992 Viruses 10239 Viruses Viruses 52.8 4.63e-6   NR XCO49393.1 1955144 g6190 i0 40 1.83333333333333 55 33 91.7 0 14 178 42 96 XCO49393.1 MAG: putative ORF1 protein [Dicistroviridae sp.] diamond 330 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
28350653 28350653 PRJNA900999_S_NODE_526_length_422_cov_5.544529_g472_i0 PRJNA900999 526 422 5.544529 23.39791238 Hebei tick virus 9 3371298 Viruses Viruses 202 2.6400000000000007e-59   NR XHY85224.1 3371298 g472 i0 79.8 0.845971563981043 119 24 84.6 0 418 62 431 549 XHY85224.1 MAG: RNA-dependent RNA polymerase [Hebei tick virus 9] diamond 357 202 1 Viruses               Hebei tick virus 9
29929640 29929640 PRJNA900999_S_NODE_8431_length_159_cov_3.992308_g8375_i0 PRJNA900999 8431 159 3.992308 6.34776972 Grapevine-associated tymo-like virus 2 2814378 Viruses Viruses 81.6 1.39e-16   NR QXN75448.1 2814378 g8375 i0 71.2 0.981132075471698 52 15 98.1 0 157 2 285 336 QXN75448.1 MAG: RNA-dependent RNA polymerase, partial [Grapevine-associated tymo-like virus 2] diamond 156 81.6 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Grapevine-associated tymo-like virus 2
32647747 32647747 PRJNA900999_S_NODE_8740_length_157_cov_3.031250_g8684_i0 PRJNA900999 8740 157 3.03125 4.7590625 Erysiphe necator associated virus 1 2741902 Viruses Viruses 65.5 1.11e-10   NR QKI79983.1 2741902 g8684 i0 64.4 1.71974522292994 45 16 86 0 2 136 486 530 QKI79983.1 RNA-dependent RNA polymerase [Erysiphe necator associated virus 1] diamond 270 65.5 1 Viruses               Erysiphe necator associated virus 1
32813046 32813046 PRJNA900999_S_NODE_420_length_458_cov_45.589744_g368_i0 PRJNA900999 420 458 45.589744 208.80102752 Viruses 10239 Viruses Viruses 132 1.64e-32   NR UYL95439.1 2972060 g368 i0 56.3 1.66375545851528 126 49 78.6 1 98 457 1 126 UYL95439.1 MAG: RNA-dependent RNA polymerase [Tongren Botou tick virus 1] diamond 762 132 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Tongren Botou tick virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;