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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA900999" and tax_phylum = "Fusobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Fusobacteriota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJNA900999 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27656239 27656239 PRJNA900999_S_NODE_4624_length_202_cov_1.965318_g4568_i0 PRJNA900999 4624 202 1.965318 3.96994236 uncultured Cetobacterium sp. 527638 Bacteria Bacteria 135 2.62e-38   NR WP_294094651.1 527638 g4568 i0 92.5 1.99009900990099 67 5 99.5 0 2 202 47 113 WP_294094651.1 tetratricopeptide repeat protein [uncultured Cetobacterium sp.] diamond 402 135 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.
28350655 28350655 PRJNA900999_S_NODE_9526_length_152_cov_2.382114_g9470_i0 PRJNA900999 9526 152 2.382114 3.62081328 Cetobacterium sp. ZWU 2071632 Bacteria Bacteria 103 1.6500000000000002e-26   NR WP_047382507.1 1340502 g9470 i0 100 0.986842105263158 50 0 98.7 0 1 150 52 101 WP_047382507.1 DUF134 domain-containing protein [Cetobacterium sp. ZWU0022] diamond 150 103 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZWU0022
28982395 28982395 PRJNA900999_S_NODE_9548_length_152_cov_1.626016_g9492_i0 PRJNA900999 9548 152 1.626016 2.47154432 unclassified Cetobacterium 2630983 Bacteria Bacteria 103 1.95e-24   NR WP_047384167.1 2630983 g9492 i0 100 0.967105263157895 49 0 96.7 0 151 5 349 397 WP_047384167.1 MULTISPECIES: bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II [unclassified Cetobacterium] diamond 147 103 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
29297958 29297958 PRJNA900999_S_NODE_3629_length_222_cov_2.492228_g3573_i0 PRJNA900999 3629 222 2.492228 5.53274616 unclassified Cetobacterium 2630983 Bacteria Bacteria 132 1.93e-36   NR WP_047382483.1 2630983 g3573 i0 100 0.905405405405405 67 0 90.5 0 21 221 1 67 WP_047382483.1 MULTISPECIES: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [unclassified Cetobacterium] diamond 201 132 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
29739692 29739692 PRJNA900999_S_NODE_3370_length_228_cov_2.336683_g3314_i0 PRJNA900999 3370 228 2.336683 5.32763724 unclassified Cetobacterium 2630983 Bacteria Bacteria 148 1.17e-41   NR WP_047380601.1 2630983 g3314 i0 100 0.986842105263158 75 0 98.7 0 3 227 50 124 WP_047380601.1 MULTISPECIES: UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [unclassified Cetobacterium] diamond 225 148 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
29803035 29803035 PRJNA900999_S_NODE_8851_length_156_cov_3.370079_g8795_i0 PRJNA900999 8851 156 3.370079 5.25732324 Cetobacterium sp. ZWU 2071632 Bacteria Bacteria 68.2 1.01e-12   NR WP_047382507.1 1340502 g8795 i0 100 0.596153846153846 31 0 59.6 0 64 156 115 145 WP_047382507.1 DUF134 domain-containing protein [Cetobacterium sp. ZWU0022] diamond 93 68.2 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZWU0022
30087340 30087340 PRJNA900999_S_NODE_7612_length_166_cov_2.802920_g7556_i0 PRJNA900999 7612 166 2.80292 4.6528472 unclassified Cetobacterium 2630983 Bacteria Bacteria 107 5.05e-26   NR WP_047383992.1 2630983 g7556 i0 100 0.975903614457831 54 0 97.6 0 3 164 329 382 WP_047383992.1 MULTISPECIES: beta-ketoacyl-ACP synthase II [unclassified Cetobacterium] diamond 162 107 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
30814078 30814078 PRJNA900999_S_NODE_7074_length_171_cov_2.676056_g7018_i0 PRJNA900999 7074 171 2.676056 4.57605576 Cetobacterium sp. ZOR 2071632 Bacteria Bacteria 80.5 3.86e-18   NR WP_047395676.1 1339239 g7018 i0 97.7 0.771929824561403 44 1 77.2 0 170 39 45 88 WP_047395676.1 hypothetical protein [Cetobacterium sp. ZOR0034] diamond 132 80.5 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
30845755 30845755 PRJNA900999_S_NODE_3174_length_233_cov_2.843137_g3118_i0 PRJNA900999 3174 233 2.843137 6.62450921 Leptotrichia sp. oral taxon 212 712357 Bacteria Bacteria 132 7.729999999999998e-35   NR WP_053391838.1 712357 g3118 i0 92.2 0.991416309012876 77 6 99.1 0 2 232 333 409 WP_053391838.1 branched-chain amino acid transport system II carrier protein [Leptotrichia sp. oral taxon 212] diamond 231 132 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia sp. oral taxon 212
31383149 31383149 PRJNA900999_S_NODE_3176_length_232_cov_419.551724_g3120_i0 PRJNA900999 3176 232 419.551724 973.35999968 unclassified Cetobacterium 2630983 Bacteria Bacteria 105 3.3e-25   NR WP_047381403.1 2630983 g3120 i0 91.8 0.788793103448276 61 5 78.9 0 191 9 192 252 WP_047381403.1 MULTISPECIES: heat-inducible transcriptional repressor HrcA [unclassified Cetobacterium] diamond 183 105 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
32490495 32490495 PRJNA900999_S_NODE_9739_length_151_cov_1.639344_g9683_i0 PRJNA900999 9739 151 1.639344 2.47540944 unclassified Cetobacterium 2630983 Bacteria Bacteria 93.2 1.08e-20   NR WP_047383992.1 2630983 g9683 i0 91.7 0.95364238410596 48 4 95.4 0 8 151 279 326 WP_047383992.1 MULTISPECIES: beta-ketoacyl-ACP synthase II [unclassified Cetobacterium] diamond 144 93.2 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;