contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA900999" and tax_clade = "PVC group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27877079 | 27877079 | PRJNA900999_S_NODE_3525_length_224_cov_6.174359_g3469_i0 | PRJNA900999 | 3525 | 224 | 6.174359 | 13.83056416 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 64.3 | 3.18e-10 | NR | TAH37332.1 | 2026780 | g3469 | i0 | 57.1 | 0.65625 | 49 | 21 | 65.6 | 0 | 217 | 71 | 190 | 238 | TAH37332.1 MAG: SDR family oxidoreductase [Planctomycetota bacterium] | diamond | 147 | 64.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28003602 | 28003602 | PRJNA900999_S_NODE_5645_length_187_cov_2.632911_g5589_i0 | PRJNA900999 | 5645 | 187 | 2.632911 | 4.92354357 | Tautonia rosea | 2728037 | Bacteria | Bacteria | 108 | 1.55e-25 | NR | WP_169976644.1 | 2728037 | g5589 | i0 | 81.7 | 0.962566844919786 | 60 | 11 | 96.3 | 0 | 185 | 6 | 1248 | 1307 | WP_169976644.1 PQQ-binding-like beta-propeller repeat protein [Tautonia rosea] | diamond | 180 | 108 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Tautonia | Tautonia rosea | |
| 28824033 | 28824033 | PRJNA900999_S_NODE_4508_length_204_cov_2.331429_g4452_i0 | PRJNA900999 | 4508 | 204 | 2.331429 | 4.75611516 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 67 | 5.93e-11 | NR | MFK7739453.1 | 2026780 | g4452 | i0 | 59.2 | 1.44117647058824 | 49 | 20 | 72.1 | 0 | 23 | 169 | 319 | 367 | MFK7739453.1 hypothetical protein [Planctomycetota bacterium] | diamond | 294 | 67 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 30372182 | 30372182 | PRJNA900999_S_NODE_9352_length_153_cov_2.419355_g9296_i0 | PRJNA900999 | 9352 | 153 | 2.419355 | 3.70161315 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 41.6 | 0.0276 | NR | MEI8366552.1 | 2052176 | g9296 | i0 | 38.6 | 0.862745098039216 | 44 | 24 | 80.4 | 1 | 20 | 142 | 172 | 215 | MEI8366552.1 hypothetical protein [Parachlamydiaceae bacterium] | diamond | 132 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 32142281 | 32142281 | PRJNA900999_S_NODE_1718_length_288_cov_8.027027_g1662_i0 | PRJNA900999 | 1718 | 288 | 8.027027 | 23.11783776 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 43.5 | 0.0318 | NR | MCK6474544.1 | 2026780 | g1662 | i0 | 30 | 0.520833333333333 | 50 | 35 | 52.1 | 0 | 258 | 109 | 235 | 284 | MCK6474544.1 DUF58 domain-containing protein [Planctomycetota bacterium] | diamond | 150 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;