RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA900999" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA900999 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28792558 28792558 PRJNA900999_S_NODE_727_length_377_cov_2.520115_g671_i0 PRJNA900999 727 377 2.520115 9.50083355 Leptodesmis sichuanensis 2906798 Bacteria Bacteria 199 2.57e-63   NR WP_233743771.1 2906798 g671 i0 83.2 0.994694960212202 125 20 99.5 1 377 3 13 136 WP_233743771.1 DUF4278 domain-containing protein [Leptodesmis sichuanensis] diamond 375 199 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Leptolyngbyales Leptolyngbyaceae Leptodesmis Leptodesmis sichuanensis
30182116 30182116 PRJNA900999_S_NODE_1652_length_292_cov_3.148289_g1596_i0 PRJNA900999 1652 292 3.148289 9.19300388 [Phormidium ambiguum] IAM M-71 454136 Bacteria Bacteria 192 6.19e-61   NR WP_073591869.1 454136 g1596 i0 90.7 0.996575342465753 97 7 99.7 1 1 291 46 140 WP_073591869.1 ATP-binding protein [[Phormidium ambiguum] IAM M-71] diamond 291 192 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Aerosakkonematales Aerosakkonemataceae Floridanema [Phormidium ambiguum] IAM M-71

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;