contig_metadata
43 rows where analysis = "diamond", bioproject = "PRJNA900028" and tax_phylum = "Spirochaetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1244832 | 1244832 | PRJNA900028_P_NODE_157201_length_164_cov_0.886957_g156452_i0 | PRJNA900028 | 157201 | 164 | 0.886957 | 1.45460948 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 93.6 | 1.56e-20 | NR | MDA3832159.1 | 2026792 | g156452 | i0 | 81.5 | 2.92682926829268 | 54 | 10 | 98.8 | 0 | 162 | 1 | 139 | 192 | MDA3832159.1 asparagine synthase (glutamine-hydrolyzing) [Spirochaetales bacterium] | diamond | 480 | 93.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 16178736 | 16178736 | PRJNA900028_P_NODE_84413_length_183_cov_1.231343_g83664_i0 | PRJNA900028 | 84413 | 183 | 1.231343 | 2.25335769 | Treponema socranskii | 53419 | Bacteria | Bacteria | 122 | 6.109999999999999e-31 | NR | WP_021329476.1 | 53419 | g83664 | i0 | 98.4 | 2 | 61 | 1 | 100 | 0 | 183 | 1 | 398 | 458 | WP_021329476.1 sugar ABC transporter ATP-binding protein [Treponema socranskii] | diamond | 366 | 122 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema socranskii | ||
| 17822394 | 17822394 | PRJNA900028_P_NODE_159434_length_164_cov_0.886957_g158685_i0 | PRJNA900028 | 159434 | 164 | 0.886957 | 1.45460948 | Treponema medium | 58231 | Bacteria | Bacteria | 91.7 | 7.06e-20 | NR | WP_206181641.1 | 58231 | g158685 | i0 | 84.9 | 1.9390243902439 | 53 | 8 | 97 | 0 | 3 | 161 | 204 | 256 | WP_206181641.1 ATP-binding protein [Treponema medium] | diamond | 318 | 91.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 26644100 | 26644100 | PRJNA900028_P_NODE_180861_length_162_cov_0.902655_g180112_i0 | PRJNA900028 | 180861 | 162 | 0.902655 | 1.4623011 | Treponema sp. | 166 | Bacteria | Bacteria | 99.8 | 9.8e-23 | NR | MFC2603888.1 | 166 | g180112 | i0 | 100 | 1.96296296296296 | 53 | 0 | 98.1 | 0 | 161 | 3 | 317 | 369 | MFC2603888.1 SpoIIE family protein phosphatase [Treponema sp.] | diamond | 318 | 99.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 26960703 | 26960703 | PRJNA900028_P_NODE_193462_length_161_cov_0.910714_g192713_i0 | PRJNA900028 | 193462 | 161 | 0.910714 | 1.46624954 | Treponema sp. OMZ 789 | 2563670 | Bacteria | Bacteria | 69.3 | 5.11e-12 | NR | UTC68434.1 | 2563670 | g192713 | i0 | 66 | 0.987577639751553 | 53 | 18 | 98.8 | 0 | 160 | 2 | 292 | 344 | UTC68434.1 HAMP domain-containing protein [Treponema sp. OMZ 789] | diamond | 159 | 69.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 789 | ||
| 27213611 | 27213611 | PRJNA900028_P_NODE_129442_length_166_cov_1.735043_g128693_i0 | PRJNA900028 | 129442 | 166 | 1.735043 | 2.88017138 | Treponema vincentii | 69710 | Bacteria | Bacteria | 108 | 8.59e-26 | NR | WP_253818592.1 | 69710 | g128693 | i0 | 89.1 | 0.993975903614458 | 55 | 6 | 99.4 | 0 | 1 | 165 | 496 | 550 | WP_253818592.1 4-alpha-glucanotransferase [Treponema vincentii] | diamond | 165 | 108 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 27284689 | 27284689 | PRJNA900028_P_NODE_77243_length_186_cov_1.489051_g76494_i0 | PRJNA900028 | 77243 | 186 | 1.489051 | 2.76963486 | Treponema | 157 | Bacteria | Bacteria | 50.4 | 3.21e-5 | NR | WP_016522627.1 | 58231 | g76494 | i0 | 58.5 | 1.70967741935484 | 53 | 19 | 83.9 | 2 | 157 | 2 | 207 | 257 | WP_016522627.1 zinc ribbon domain-containing protein [Treponema medium] | diamond | 318 | 50.8 | 0.992125984251969 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 27348098 | 27348098 | PRJNA900028_P_NODE_179043_length_162_cov_0.902655_g178294_i0 | PRJNA900028 | 179043 | 162 | 0.902655 | 1.4623011 | Candidatus Gallitreponema | 2840652 | Bacteria | Bacteria | 78.6 | 2.98e-15 | NR | MBE6350791.1 | 1898206 | g178294 | i0 | 67.9 | 2.94444444444444 | 53 | 17 | 98.1 | 0 | 4 | 162 | 405 | 457 | MBE6350791.1 ATPase [Spirochaetaceae bacterium] | diamond | 477 | 78.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 27372167 | 27372167 | PRJNA900028_P_NODE_125863_length_167_cov_0.864407_g125114_i0 | PRJNA900028 | 125863 | 167 | 0.864407 | 1.44355969 | Treponema | 157 | Bacteria | Bacteria | 67.4 | 2.53e-11 | NR | WP_002676219.1 | 157 | g125114 | i0 | 58.9 | 1.0059880239521 | 56 | 22 | 98.8 | 1 | 3 | 167 | 212 | 267 | WP_002676219.1 MULTISPECIES: FGGY-family carbohydrate kinase [Treponema] | diamond | 168 | 67.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | |||
| 27624619 | 27624619 | PRJNA900028_P_NODE_178104_length_162_cov_0.902655_g177355_i0 | PRJNA900028 | 178104 | 162 | 0.902655 | 1.4623011 | Treponema lecithinolyticum | 53418 | Bacteria | Bacteria | 99.8 | 9.46e-23 | NR | WP_021687821.1 | 53418 | g177355 | i0 | 96.2 | 0.981481481481482 | 53 | 2 | 98.1 | 0 | 3 | 161 | 45 | 97 | WP_021687821.1 apolipoprotein N-acyltransferase [Treponema lecithinolyticum] | diamond | 159 | 99.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema lecithinolyticum | ||
| 28003546 | 28003546 | PRJNA900028_P_NODE_134725_length_166_cov_0.871795_g133976_i0 | PRJNA900028 | 134725 | 166 | 0.871795 | 1.4471797 | Treponema vincentii | 69710 | Bacteria | Bacteria | 87.4 | 2.76e-19 | NR | WP_253818270.1 | 69710 | g133976 | i0 | 72.7 | 0.993975903614458 | 55 | 15 | 99.4 | 0 | 2 | 166 | 15 | 69 | WP_253818270.1 tetratricopeptide repeat protein [Treponema vincentii] | diamond | 165 | 87.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 28011221 | 28011221 | PRJNA900028_P_NODE_166245_length_163_cov_0.894737_g165496_i0 | PRJNA900028 | 166245 | 163 | 0.894737 | 1.45842131 | Treponema | 157 | Bacteria | Bacteria | 98.2 | 4.09e-24 | NR | WP_230977751.1 | 69710 | g165496 | i0 | 83.3 | 1.98773006134969 | 54 | 9 | 99.4 | 0 | 1 | 162 | 48 | 101 | WP_230977751.1 hypothetical protein [Treponema vincentii] | diamond | 324 | 98.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 28066445 | 28066445 | PRJNA900028_P_NODE_117345_length_167_cov_1.728814_g116596_i0 | PRJNA900028 | 117345 | 167 | 1.728814 | 2.88711938 | Treponema phagedenis | 162 | Bacteria | Bacteria | 67 | 3.61e-11 | NR | WP_024752088.1 | 162 | g116596 | i0 | 62.5 | 1.72455089820359 | 48 | 18 | 86.2 | 0 | 165 | 22 | 429 | 476 | WP_024752088.1 carbon starvation protein A [Treponema phagedenis] | diamond | 288 | 67 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema phagedenis | ||
| 28192548 | 28192548 | PRJNA900028_P_NODE_124486_length_167_cov_0.864407_g123737_i0 | PRJNA900028 | 124486 | 167 | 0.864407 | 1.44355969 | Sphaerochaeta sp. | 1972642 | Bacteria | Bacteria | 94.4 | 6.160000000000001e-22 | NR | MFA6733422.1 | 1972642 | g123737 | i0 | 90.9 | 0.988023952095808 | 55 | 5 | 98.8 | 0 | 167 | 3 | 141 | 195 | MFA6733422.1 hypothetical protein [Sphaerochaeta sp.] | diamond | 165 | 94.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta sp. | ||
| 28571615 | 28571615 | PRJNA900028_P_NODE_181927_length_162_cov_0.902655_g181178_i0 | PRJNA900028 | 181927 | 162 | 0.902655 | 1.4623011 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 49.7 | 3.79e-5 | NR | GHU44176.1 | 2053615 | g181178 | i0 | 52.2 | 2.74074074074074 | 46 | 22 | 85.2 | 0 | 151 | 14 | 42 | 87 | GHU44176.1 hypothetical protein FACS1894190_15330 [Spirochaetia bacterium] | diamond | 444 | 49.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 28603352 | 28603352 | PRJNA900028_P_NODE_186507_length_161_cov_3.151786_g185758_i0 | PRJNA900028 | 186507 | 161 | 3.151786 | 5.07437546 | Treponema vincentii | 69710 | Bacteria | Bacteria | 50.8 | 1.7e-5 | NR | WP_038076631.1 | 69710 | g185758 | i0 | 100 | 0.46583850931677 | 25 | 0 | 46.6 | 0 | 161 | 87 | 1026 | 1050 | WP_038076631.1 tetratricopeptide repeat protein [Treponema vincentii] | diamond | 75 | 50.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 28674081 | 28674081 | PRJNA900028_P_NODE_132767_length_166_cov_0.871795_g132018_i0 | PRJNA900028 | 132767 | 166 | 0.871795 | 1.4471797 | Treponema | 157 | Bacteria | Bacteria | 67.4 | 2.54e-11 | NR | PIE99050.1 | 166 | g132018 | i0 | 50 | 3.90361445783133 | 54 | 27 | 97.6 | 0 | 164 | 3 | 122 | 175 | PIE99050.1 MAG: flagellar hook protein FliD [Treponema sp.] | diamond | 648 | 67.8 | 0.994100294985251 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 28887293 | 28887293 | PRJNA900028_P_NODE_172168_length_163_cov_0.894737_g171419_i0 | PRJNA900028 | 172168 | 163 | 0.894737 | 1.45842131 | Treponema sp. | 166 | Bacteria | Bacteria | 103 | 4.059999999999999e-24 | NR | MCR5400772.1 | 166 | g171419 | i0 | 81.5 | 3.97546012269939 | 54 | 10 | 99.4 | 0 | 1 | 162 | 17 | 70 | MCR5400772.1 MBL fold metallo-hydrolase [Treponema sp.] | diamond | 648 | 103 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 28918789 | 28918789 | PRJNA900028_P_NODE_156568_length_164_cov_0.886957_g155819_i0 | PRJNA900028 | 156568 | 164 | 0.886957 | 1.45460948 | Treponema pedis | 409322 | Bacteria | Bacteria | 67 | 2.24e-11 | NR | WP_024469247.1 | 409322 | g155819 | i0 | 64.6 | 0.878048780487805 | 48 | 17 | 87.8 | 0 | 164 | 21 | 152 | 199 | WP_024469247.1 peptide ABC transporter ATPase [Treponema pedis] | diamond | 144 | 67 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema pedis | ||
| 29108556 | 29108556 | PRJNA900028_P_NODE_161148_length_164_cov_0.886957_g160399_i0 | PRJNA900028 | 161148 | 164 | 0.886957 | 1.45460948 | Treponema maltophilum | 51160 | Bacteria | Bacteria | 105 | 6.08e-26 | NR | WP_016524440.1 | 51160 | g160399 | i0 | 98.1 | 0.969512195121951 | 53 | 1 | 97 | 0 | 161 | 3 | 83 | 135 | WP_016524440.1 TrmH family RNA methyltransferase [Treponema maltophilum] | diamond | 159 | 105 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema maltophilum | ||
| 29203364 | 29203364 | PRJNA900028_P_NODE_181829_length_162_cov_0.902655_g181080_i0 | PRJNA900028 | 181829 | 162 | 0.902655 | 1.4623011 | Treponema sp. | 166 | Bacteria | Bacteria | 58.9 | 2.21e-8 | NR | MBR1405042.1 | 166 | g181080 | i0 | 50.9 | 0.981481481481482 | 53 | 26 | 98.1 | 0 | 3 | 161 | 172 | 224 | MBR1405042.1 acyltransferase family protein [Treponema sp.] | diamond | 159 | 58.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 29266105 | 29266105 | PRJNA900028_P_NODE_113269_length_169_cov_1.700000_g112520_i0 | PRJNA900028 | 113269 | 169 | 1.7 | 2.873 | Treponema sp. OMZ 799 | 2563668 | Bacteria | Bacteria | 104 | 1.9e-26 | NR | WP_253709755.1 | 2563668 | g112520 | i0 | 91.1 | 0.994082840236686 | 56 | 5 | 99.4 | 0 | 168 | 1 | 29 | 84 | WP_253709755.1 MptD family putative ECF transporter S component [Treponema sp. OMZ 799] | diamond | 168 | 104 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 799 | ||
| 29305443 | 29305443 | PRJNA900028_P_NODE_76809_length_186_cov_1.489051_g76060_i0 | PRJNA900028 | 76809 | 186 | 1.489051 | 2.76963486 | FCB group | 1783270 | Bacteria | Bacteria | 85.1 | 2.62e-19 | NR | MCL2721606.1 | 166 | g76060 | i0 | 65.6 | 12.8225806451613 | 61 | 21 | 98.4 | 0 | 184 | 2 | 3 | 63 | MCL2721606.1 hypothetical protein [Treponema sp.] | diamond | 2385 | 85.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 29361107 | 29361107 | PRJNA900028_P_NODE_75129_length_187_cov_1.442029_g74380_i0 | PRJNA900028 | 75129 | 187 | 1.442029 | 2.69659423 | Spirochaetaceae bacterium | 1898206 | Bacteria | Bacteria | 53.9 | 1.98e-6 | NR | MBQ3024183.1 | 1898206 | g74380 | i0 | 52.2 | 0.737967914438503 | 46 | 22 | 73.8 | 0 | 1 | 138 | 186 | 231 | MBQ3024183.1 ankyrin repeat domain-containing protein [Spirochaetaceae bacterium] | diamond | 138 | 53.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 29423955 | 29423955 | PRJNA900028_P_NODE_136009_length_166_cov_0.871795_g135260_i0 | PRJNA900028 | 136009 | 166 | 0.871795 | 1.4471797 | Leptospira licerasiae | 447106 | Bacteria | Bacteria | 110 | 1.3500000000000002e-26 | NR | WP_008589896.1 | 447106 | g135260 | i0 | 98.1 | 0.975903614457831 | 54 | 1 | 97.6 | 0 | 5 | 166 | 26 | 79 | WP_008589896.1 sensor histidine kinase [Leptospira licerasiae] | diamond | 162 | 110 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira licerasiae | ||
| 29771311 | 29771311 | PRJNA900028_P_NODE_109471_length_171_cov_1.672131_g108722_i0 | PRJNA900028 | 109471 | 171 | 1.672131 | 2.85934401 | Treponema sp. OMZ 838 | 1539298 | Bacteria | Bacteria | 89.7 | 1.43e-19 | NR | WP_044014048.1 | 1539298 | g108722 | i0 | 66.1 | 0.982456140350877 | 56 | 19 | 98.2 | 0 | 169 | 2 | 111 | 166 | WP_044014048.1 RnfABCDGE type electron transport complex subunit D [Treponema sp. OMZ 838] | diamond | 168 | 89.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 838 | ||
| 30094863 | 30094863 | PRJNA900028_P_NODE_166332_length_163_cov_0.894737_g165583_i0 | PRJNA900028 | 166332 | 163 | 0.894737 | 1.45842131 | Treponema | 157 | Bacteria | Bacteria | 107 | 7.32e-26 | NR | WP_016518312.1 | 69710 | g165583 | i0 | 90.7 | 2.98159509202454 | 54 | 5 | 99.4 | 0 | 163 | 2 | 328 | 381 | WP_016518312.1 ABC transporter substrate-binding protein [Treponema vincentii] | diamond | 486 | 107 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 30150343 | 30150343 | PRJNA900028_P_NODE_196212_length_161_cov_0.910714_g195463_i0 | PRJNA900028 | 196212 | 161 | 0.910714 | 1.46624954 | Treponema sp. | 166 | Bacteria | Bacteria | 96.3 | 2.67e-22 | NR | MFC2603709.1 | 166 | g195463 | i0 | 100 | 1.90062111801242 | 51 | 0 | 95 | 0 | 155 | 3 | 1 | 51 | MFC2603709.1 FAD-dependent oxidoreductase [Treponema sp.] | diamond | 306 | 96.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 30372130 | 30372130 | PRJNA900028_P_NODE_124032_length_167_cov_0.864407_g123283_i0 | PRJNA900028 | 124032 | 167 | 0.864407 | 1.44355969 | Treponema sp. | 166 | Bacteria | Bacteria | 105 | 5.56e-28 | NR | WP_318691445.1 | 166 | g123283 | i0 | 90.9 | 0.988023952095808 | 55 | 5 | 98.8 | 0 | 167 | 3 | 47 | 101 | WP_318691445.1 hypothetical protein [Treponema sp.] | diamond | 165 | 105 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 30466817 | 30466817 | PRJNA900028_P_NODE_138233_length_166_cov_0.871795_g137484_i0 | PRJNA900028 | 138233 | 166 | 0.871795 | 1.4471797 | uncultured spirochete | 156406 | Bacteria | Bacteria | 75.9 | 6.92e-15 | NR | SLM17633.1 | 156406 | g137484 | i0 | 75.5 | 0.957831325301205 | 53 | 13 | 95.8 | 0 | 3 | 161 | 193 | 245 | SLM17633.1 Uncharacterized membrane protein jhp_1251 [uncultured spirochete] | diamond | 159 | 75.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | uncultured spirochete | ||||
| 31232274 | 31232274 | PRJNA900028_P_NODE_70335_length_189_cov_1.457143_g69586_i0 | PRJNA900028 | 70335 | 189 | 1.457143 | 2.75400027 | Treponema | 157 | Bacteria | Bacteria | 123 | 9.13e-31 | NR | WP_147623961.1 | 158 | g69586 | i0 | 93.5 | 1.98412698412698 | 62 | 4 | 98.4 | 0 | 4 | 189 | 596 | 657 | WP_147623961.1 hypothetical protein [Treponema denticola] | diamond | 375 | 123 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 31256421 | 31256421 | PRJNA900028_P_NODE_115655_length_168_cov_1.714286_g114906_i0 | PRJNA900028 | 115655 | 168 | 1.714286 | 2.88000048 | Treponema medium | 58231 | Bacteria | Bacteria | 99.4 | 1.7e-24 | NR | WP_016523824.1 | 58231 | g114906 | i0 | 92.7 | 0.982142857142857 | 55 | 4 | 98.2 | 0 | 3 | 167 | 94 | 148 | WP_016523824.1 ribosome recycling factor [Treponema medium] | diamond | 165 | 99.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 31383142 | 31383142 | PRJNA900028_P_NODE_90076_length_180_cov_1.557252_g89327_i0 | PRJNA900028 | 90076 | 180 | 1.557252 | 2.8030536 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 83.2 | 5.99e-17 | NR | MFP4382712.1 | 2053615 | g89327 | i0 | 57.9 | 1.8 | 57 | 24 | 95 | 0 | 179 | 9 | 139 | 195 | MFP4382712.1 DegT/DnrJ/EryC1/StrS family aminotransferase [Spirochaetia bacterium] | diamond | 324 | 83.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 31414660 | 31414660 | PRJNA900028_P_NODE_81876_length_184_cov_1.444444_g81127_i0 | PRJNA900028 | 81876 | 184 | 1.444444 | 2.65777696 | Treponema | 157 | Bacteria | Bacteria | 95.9 | 2.5e-21 | NR | WP_212565151.1 | 157 | g81127 | i0 | 79.7 | 0.96195652173913 | 59 | 12 | 96.2 | 0 | 3 | 179 | 231 | 289 | WP_212565151.1 MULTISPECIES: 6-hydroxymethylpterin diphosphokinase MptE-like protein [Treponema] | diamond | 177 | 95.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | |||
| 31889005 | 31889005 | PRJNA900028_P_NODE_95057_length_178_cov_1.395349_g94308_i0 | PRJNA900028 | 95057 | 178 | 1.395349 | 2.48372122 | Treponema maltophilum | 51160 | Bacteria | Bacteria | 115 | 3.4600000000000003e-29 | NR | WP_016525778.1 | 51160 | g94308 | i0 | 98.3 | 0.99438202247191 | 59 | 1 | 99.4 | 0 | 177 | 1 | 93 | 151 | WP_016525778.1 protease modulator HflC [Treponema maltophilum] | diamond | 177 | 115 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema maltophilum | ||
| 31983859 | 31983859 | PRJNA900028_P_NODE_107158_length_172_cov_1.658537_g106409_i0 | PRJNA900028 | 107158 | 172 | 1.658537 | 2.85268364 | Treponema sp. | 166 | Bacteria | Bacteria | 77 | 1.13e-14 | NR | MDR3173226.1 | 166 | g106409 | i0 | 69.6 | 2.93023255813953 | 56 | 17 | 97.7 | 0 | 3 | 170 | 275 | 330 | MDR3173226.1 pyruvate, phosphate dikinase [Treponema sp.] | diamond | 504 | 77 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 32181604 | 32181604 | PRJNA900028_P_NODE_94598_length_178_cov_1.581395_g93849_i0 | PRJNA900028 | 94598 | 178 | 1.581395 | 2.8148831 | Treponema | 157 | Bacteria | Bacteria | 119 | 1.1e-29 | NR | MBQ7753353.1 | 166 | g93849 | i0 | 98.3 | 18.876404494382 | 59 | 1 | 99.4 | 0 | 178 | 2 | 274 | 332 | MBQ7753353.1 alanine--tRNA ligase [Treponema sp.] | diamond | 3360 | 119 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 32522165 | 32522165 | PRJNA900028_P_NODE_136999_length_166_cov_0.871795_g136250_i0 | PRJNA900028 | 136999 | 166 | 0.871795 | 1.4471797 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 90.5 | 1.85e-19 | NR | MCB1177415.1 | 2026757 | g136250 | i0 | 80 | 0.993975903614458 | 55 | 11 | 99.4 | 0 | 165 | 1 | 150 | 204 | MCB1177415.1 NACHT domain-containing protein [Leptospiraceae bacterium] | diamond | 165 | 90.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 32522170 | 32522170 | PRJNA900028_P_NODE_149559_length_165_cov_0.879310_g148810_i0 | PRJNA900028 | 149559 | 165 | 0.87931 | 1.4508615 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 60.5 | 7.03e-9 | NR | HOG65006.1 | 2202144 | g148810 | i0 | 49.1 | 1.92727272727273 | 53 | 27 | 96.4 | 0 | 3 | 161 | 174 | 226 | HOG65006.1 PAS domain S-box protein [Spirochaetota bacterium] | diamond | 318 | 60.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 32553824 | 32553824 | PRJNA900028_P_NODE_170099_length_163_cov_0.894737_g169350_i0 | PRJNA900028 | 170099 | 163 | 0.894737 | 1.45842131 | Brachyspira hyodysenteriae | 159 | Bacteria | Bacteria | 54.7 | 6.9e-7 | NR | WP_269985515.1 | 159 | g169350 | i0 | 77.8 | 1.52760736196319 | 27 | 6 | 49.7 | 0 | 82 | 2 | 1 | 27 | WP_269985515.1 type II restriction endonuclease [Brachyspira hyodysenteriae] | diamond | 249 | 54.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira hyodysenteriae | ||
| 32585266 | 32585266 | PRJNA900028_P_NODE_171519_length_163_cov_0.894737_g170770_i0 | PRJNA900028 | 171519 | 163 | 0.894737 | 1.45842131 | Treponema vincentii | 69710 | Bacteria | Bacteria | 70.5 | 1.27e-12 | NR | WP_253807826.1 | 69710 | g170770 | i0 | 90.2 | 1.50920245398773 | 41 | 4 | 75.5 | 0 | 3 | 125 | 43 | 83 | WP_253807826.1 DEAD/DEAH box helicase family protein [Treponema vincentii] | diamond | 246 | 70.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 32624079 | 32624079 | PRJNA900028_P_NODE_93720_length_179_cov_1.038462_g92971_i0 | PRJNA900028 | 93720 | 179 | 1.038462 | 1.85884698 | Bacteria | 2 | Bacteria | Bacteria | 58.5 | 4.21e-8 | NR | OQA99607.1 | 1852906 | g92971 | i0 | 55.1 | 1.64245810055866 | 49 | 22 | 82.1 | 0 | 32 | 178 | 913 | 961 | OQA99607.1 MAG: Blue-light-activated protein [Spirochaetes bacterium ADurb.Bin218] | diamond | 294 | 58.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetes bacterium ADurb.Bin218 | ||||||
| 32868378 | 32868378 | PRJNA900028_P_NODE_142620_length_165_cov_0.879310_g141871_i0 | PRJNA900028 | 142620 | 165 | 0.87931 | 1.4508615 | Treponema sp. OMZ 838 | 1539298 | Bacteria | Bacteria | 70.1 | 2.86e-12 | NR | WP_044016522.1 | 1539298 | g141871 | i0 | 71.2 | 0.945454545454545 | 52 | 14 | 94.5 | 1 | 2 | 157 | 762 | 812 | WP_044016522.1 ATP-dependent Clp protease ATP-binding subunit [Treponema sp. OMZ 838] | diamond | 156 | 70.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 838 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;