RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA900028" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA900028 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27024083 27024083 PRJNA900028_P_NODE_1282_length_1086_cov_2.729026_g737_i0 PRJNA900028 1282 1086 2.729026 29.63722236 Rhizophagus irregularis DAOM 197198w 1432141 Fungi Fungi 263 1.2899999999999999e-82   NR EXX69067.1 1432141 g737 i0 56.5 0.635359116022099 230 99 63.3 1 392 1078 4 233 EXX69067.1 hypothetical protein RirG_099310 [Rhizophagus irregularis DAOM 197198w] diamond 690 263 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
27687975 27687975 PRJNA900028_P_NODE_107184_length_172_cov_1.658537_g106435_i0 PRJNA900028 107184 172 1.658537 2.85268364 Sporodiniella umbellata 101117 Fungi Fungi 91.7 7.46e-20   NR KAI9264482.1 101117 g106435 i0 77.8 5.82558139534884 54 12 94.2 0 2 163 284 337 KAI9264482.1 hypothetical protein BY458DRAFT_228430 [Sporodiniella umbellata] diamond 1002 91.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Sporodiniella Sporodiniella umbellata
28224136 28224136 PRJNA900028_P_NODE_1026_length_1274_cov_2.875918_g546_i0 PRJNA900028 1026 1274 2.875918 36.63919532 Rhizophagus irregularis DAOM 197198w 1432141 Fungi Fungi 477 6.369999999999999e-166   NR EXX69067.1 1432141 g546 i0 82.1 0.685243328100471 291 51 68.5 1 32 904 1 290 EXX69067.1 hypothetical protein RirG_099310 [Rhizophagus irregularis DAOM 197198w] diamond 873 477 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;