RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA900028" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA900028 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26683470 26683470 PRJNA900028_P_NODE_188041_length_161_cov_1.366071_g187292_i0 PRJNA900028 188041 161 1.366071 2.19937431 FCB group 1783270 Bacteria Bacteria 54.7 7.3900000000000007e-08   NR PIZ65599.1 1975522 g187292 i0 70.3 2.08695652173913 37 11 68.9 0 115 5 1 37 PIZ65599.1 MAG: hypothetical protein COY19_07725, partial [Fidelibacterota bacterium CG_4_10_14_0_2_um_filter_48_9] diamond 336 55.1 0.992740471869329 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium CG_4_10_14_0_2_um_filter_48_9
28224151 28224151 PRJNA900028_P_NODE_146206_length_165_cov_0.879310_g145457_i0 PRJNA900028 146206 165 0.87931 1.4508615 Fidelibacterota bacterium 2026760 Bacteria Bacteria 46.2 7.97e-4   NR NQV49081.1 2026760 g145457 i0 41.8 1 55 24 85.5 1 1 141 291 345 NQV49081.1 endonuclease [Fidelibacterota bacterium] diamond 165 46.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31319666 31319666 PRJNA900028_P_NODE_161035_length_164_cov_0.886957_g160286_i0 PRJNA900028 161035 164 0.886957 1.45460948 Fidelibacterota bacterium 2026760 Bacteria Bacteria 41.2 0.0368   NR MBT3960520.1 2026760 g160286 i0 57.6 0.603658536585366 33 14 60.4 0 59 157 7 39 MBT3960520.1 prepilin-type N-terminal cleavage/methylation domain-containing protein [Fidelibacterota bacterium] diamond 99 41.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;