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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA900028" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 13 ✖

bioproject 1

  • PRJNA900028 · 13 ✖

analysis 1

  • diamond · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12725300 12725300 PRJNA900028_P_NODE_89390_length_181_cov_1.143939_g88641_i0 PRJNA900028 89390 181 1.143939 2.07052959 Chlorophyta 3041 Plants Plants 95.1 3.02e-21   NR PRW58440.1 3076 g88641 i0 71.7 5.96685082872928 60 17 99.4 0 181 2 263 322 PRW58440.1 phosphoglycerate kinase [Chlorella sorokiniana] diamond 1080 95.9 0.991657977059437 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
17452650 17452650 PRJNA900028_P_NODE_117674_length_167_cov_1.728814_g116925_i0 PRJNA900028 117674 167 1.728814 2.88711938 root 1 Root_unresolved Root_unresolved 85.1 1.55e-17   NR KAJ9518463.1 44745 g116925 i0 81.6 10.437125748503 49 9 88 0 166 20 149 197 KAJ9518463.1 hypothetical protein QJQ45_018485 [Haematococcus lacustris] diamond 1743 85.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
27568884 27568884 PRJNA900028_P_NODE_80504_length_185_cov_1.117647_g79755_i0 PRJNA900028 80504 185 1.117647 2.06764695 Trebouxia 13786 Plants Plants 44.7 0.00367   NR KAA6428449.1 2608996 g79755 i0 58.3 2.33513513513514 36 15 58.4 0 19 126 1364 1399 KAA6428449.1 MAG: DNA ligase [Trebouxia sp. A1-2] diamond 432 44.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
27758706 27758706 PRJNA900028_P_NODE_172984_length_163_cov_0.894737_g172235_i0 PRJNA900028 172984 163 0.894737 1.45842131 Chlorella 3071 Plants Plants 70.9 1.54e-12   NR PRW57419.1 3076 g172235 i0 81 5.26380368098159 42 8 77.3 0 5 130 1565 1606 PRW57419.1 DNA polymerase zeta [Chlorella sorokiniana] diamond 858 70.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
28003547 28003547 PRJNA900028_P_NODE_136305_length_166_cov_0.871795_g135556_i0 PRJNA900028 136305 166 0.871795 1.4471797 Tetradesmus obliquus 3088 Plants Plants 50.4 2.5e-5   NR WIA40489.1 3088 g135556 i0 49 1.7710843373494 51 26 92.2 0 13 165 146 196 WIA40489.1 hypothetical protein OEZ86_013842 [Tetradesmus obliquus] diamond 294 50.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
28129744 28129744 PRJNA900028_P_NODE_157185_length_164_cov_0.886957_g156436_i0 PRJNA900028 157185 164 0.886957 1.45460948 Trebouxia sp. C 2796353 Plants Plants 57.8 6.32e-8   NR KAL3162659.1 3373144 g156436 i0 69.6 1.79268292682927 46 14 84.1 0 164 27 236 281 KAL3162659.1 Cytosolic carboxypeptidase 6 [Trebouxia sp. C0009 RCD-2024] diamond 294 57.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0009 RCD-2024
28192579 28192579 PRJNA900028_P_NODE_190166_length_161_cov_0.910714_g189417_i0 PRJNA900028 190166 161 0.910714 1.46624954 Micractinium tetrahymenae 2728915 Plants Plants 52 6.59e-6   NR KAL4444155.1 2728915 g189417 i0 60.5 0.708074534161491 38 15 70.8 0 25 138 293 330 KAL4444155.1 hypothetical protein ABPG75_011892 [Micractinium tetrahymenae] diamond 114 52 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium tetrahymenae
28389824 28389824 PRJNA900028_P_NODE_157606_length_164_cov_0.886957_g156857_i0 PRJNA900028 157606 164 0.886957 1.45460948 Chlorellaceae 35461 Plants Plants 45.4 0.00143   NR PRW58157.1 3076 g156857 i0 61.3 3.96951219512195 31 12 56.7 0 27 119 424 454 PRW58157.1 zinc finger CCCH domain-containing ZFN-like isoform X1 [Chlorella sorokiniana] diamond 651 45.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
28540378 28540378 PRJNA900028_P_NODE_94187_length_178_cov_1.581395_g93438_i0 PRJNA900028 94187 178 1.581395 2.8148831 Trebouxia sp. C 2796353 Plants Plants 81.6 2.89e-16   NR KAL0024637.1 2905653 g93438 i0 66.7 3.03370786516854 60 19 99.4 1 178 2 113 172 KAL0024637.1 hypothetical protein WJX77_004945 [Trebouxia sp. C0004] diamond 540 81.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0004
28729586 28729586 PRJNA900028_P_NODE_182767_length_162_cov_0.902655_g182018_i0 PRJNA900028 182767 162 0.902655 1.4623011 Apatococcus lobatus 904363 Plants Plants 59.7 1.31e-8   NR KAK9816282.1 904363 g182018 i0 100 0.481481481481481 26 0 48.1 0 78 1 374 399 KAK9816282.1 hypothetical protein WJX74_002986 [Apatococcus lobatus] diamond 78 59.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Apatococcus Apatococcus lobatus
29171754 29171754 PRJNA900028_P_NODE_85849_length_182_cov_1.533835_g85100_i0 PRJNA900028 85849 182 1.533835 2.7915797 Coccomyxa subellipsoidea 248742 Plants Plants 45.4 0.00181   NR KAK9904674.1 248742 g85100 i0 55.3 0.626373626373626 38 17 62.6 0 14 127 305 342 KAK9904674.1 hypothetical protein WJX75_000388 [Coccomyxa subellipsoidea] diamond 114 45.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
29234783 29234783 PRJNA900028_P_NODE_126849_length_167_cov_0.864407_g126100_i0 PRJNA900028 126849 167 0.864407 1.44355969 Symbiochloris handae 1853882 Plants Plants 44.7 0.00284   NR YP_009104797.1 1853882 g126100 i0 45.7 0.826347305389222 46 23 82.6 1 29 166 1304 1347 YP_009104797.1 beta'' subunit of RNA polymerase [Symbiochloris handae] diamond 138 44.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris handae
29550287 29550287 PRJNA900028_P_NODE_180430_length_162_cov_0.902655_g179681_i0 PRJNA900028 180430 162 0.902655 1.4623011 Edaphochlamys debaryana 47281 Plants Plants 55.8 6.49e-8   NR KAG2484231.1 47281 g179681 i0 49.1 0.981481481481482 53 27 98.1 0 159 1 63 115 KAG2484231.1 hypothetical protein HYH03_016966 [Edaphochlamys debaryana] diamond 159 55.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;