RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA898105" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA898105 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26802468 26802468 PRJNA898105_P_NODE_7201_length_246_cov_0.890173_g7001_i0 PRJNA898105 7201 246 0.890173 2.18982558 Polyangia bacterium 3058050 Bacteria Bacteria 67 4.01e-12   NR HVY41087.1 3058050 g7001 i0 70.2 1.75609756097561 47 14 57.3 0 245 105 51 97 HVY41087.1 DUF2325 domain-containing protein [Polyangia bacterium] diamond 432 67 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
29992612 29992612 PRJNA898105_P_NODE_8031_length_242_cov_1.497041_g7831_i0 PRJNA898105 8031 242 1.497041 3.62283922 Polyangia bacterium 3058050 Bacteria Bacteria 52.8 1.1e-5   NR HEY8925458.1 3058050 g7831 i0 55.8 1.1900826446281 52 20 60.7 1 240 94 1315 1366 HEY8925458.1 chemotaxis protein CheB [Polyangia bacterium] diamond 288 52.8 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;