contig_metadata
4 rows where analysis = "diamond", bioproject = "PRJNA898105" and tax_phylum = "Chordata"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27055857 | 27055857 | PRJNA898105_P_NODE_2282_length_390_cov_2.186120_g2082_i0 | PRJNA898105 | 2282 | 390 | 2.18612 | 8.525868 | Staurois parvus | 386267 | Chordata | Chordata | 58.5 | 5e-8 | NR | CAI9533415.1 | 386267 | g2082 | i0 | 40 | 2.6 | 110 | 47 | 70 | 4 | 306 | 34 | 1 | 110 | CAI9533415.1 unnamed protein product [Staurois parvus] | diamond | 1014 | 58.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Ranidae | Staurois | Staurois parvus | |
| 28413866 | 28413866 | PRJNA898105_P_NODE_6186_length_251_cov_0.865169_g5986_i0 | PRJNA898105 | 6186 | 251 | 0.865169 | 2.17157419 | Bufotes viridis | 30338 | Chordata | Chordata | 48.1 | 5.04e-4 | NR | CAK8609802.1 | 30338 | g5986 | i0 | 61.8 | 0.406374501992032 | 34 | 13 | 40.6 | 0 | 150 | 251 | 1 | 34 | CAK8609802.1 Lamina-associated polypeptide 2, isoform alpha [Bufotes viridis] | diamond | 102 | 48.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Bufonidae | Bufotes | Bufotes viridis | |
| 29045388 | 29045388 | PRJNA898105_P_NODE_8288_length_241_cov_0.916667_g8088_i0 | PRJNA898105 | 8288 | 241 | 0.916667 | 2.20916747 | Staurois parvus | 386267 | Chordata | Chordata | 74.3 | 3.94e-15 | NR | CAI9618505.1 | 386267 | g8088 | i0 | 48.2 | 1.03319502074689 | 83 | 36 | 98.3 | 3 | 3 | 239 | 13 | 92 | CAI9618505.1 unnamed protein product, partial [Staurois parvus] | diamond | 249 | 74.3 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Ranidae | Staurois | Staurois parvus | |
| 31738361 | 31738361 | PRJNA898105_P_NODE_7937_length_243_cov_0.905882_g7737_i0 | PRJNA898105 | 7937 | 243 | 0.905882 | 2.20129326 | Metazoa | 33208 | Chordata | Chordata | 57 | 3.6e-7 | NR | KAI8478467.1 | 7741 | g7737 | i0 | 41.6 | 3.03703703703704 | 77 | 40 | 88.9 | 1 | 7 | 222 | 39 | 115 | KAI8478467.1 WD repeat-containing protein 26 [Branchiostoma belcheri] | diamond | 738 | 57 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Leptocardii | Amphioxiformes | Branchiostomatidae | Branchiostoma | Branchiostoma belcheri |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;