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contig_metadata

28 rows where analysis = "diamond", bioproject = "PRJNA898105" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 28 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA898105 · 28 ✖

analysis 1

  • diamond · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8526650 8526650 PRJNA898105_P_NODE_4887_length_274_cov_1.532338_g4687_i0 PRJNA898105 4887 274 1.532338 4.19860612 Algoriphagus 246875 Bacteria Bacteria 171 4.46e-49   NR WP_092730310.1 279824 g4687 i0 95.5 2.94525547445255 89 4 97.4 0 3 269 190 278 WP_092730310.1 class II fumarate hydratase [Algoriphagus alkaliphilus] diamond 807 171 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cyclobacteriaceae Algoriphagus Algoriphagus alkaliphilus
21275807 21275807 PRJNA898105_P_NODE_6737_length_248_cov_1.685714_g6537_i0 PRJNA898105 6737 248 1.685714 4.18057072 Bacteroidota 976 Bacteria Bacteria 131 2.8200000000000002e-36   NR HEY1114057.1 1869212 g6537 i0 81.5 3.94354838709677 81 15 98 0 5 247 42 122 HEY1114057.1 NAD(P)-binding domain-containing protein [Chitinophagaceae bacterium] diamond 978 131 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
23826037 23826037 PRJNA898105_P_NODE_8359_length_241_cov_0.916667_g8159_i0 PRJNA898105 8359 241 0.916667 2.20916747 Marinilabiliales bacterium 2053303 Bacteria Bacteria 139 2.38e-36   NR PLW92735.1 2053303 g8159 i0 82.5 6.97095435684647 80 14 99.6 0 240 1 422 501 PLW92735.1 MAG: catalase/peroxidase HPI [Marinilabiliales bacterium] diamond 1680 139 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Marinilabiliales     Marinilabiliales bacterium
26612412 26612412 PRJNA898105_P_NODE_5741_length_258_cov_1.572973_g5541_i0 PRJNA898105 5741 258 1.572973 4.05827034 Ferruginibacter sp. HRS2-29 2487334 Bacteria Bacteria 114 3.33e-30   NR WP_255154460.1 2487334 g5541 i0 96.6 0.686046511627907 59 2 68.6 0 1 177 80 138 WP_255154460.1 hypothetical protein [Ferruginibacter sp. HRS2-29] diamond 177 114 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Ferruginibacter Ferruginibacter sp. HRS2-29
26675574 26675574 PRJNA898105_P_NODE_7401_length_245_cov_1.680233_g7201_i0 PRJNA898105 7401 245 1.680233 4.11657085 Crocinitomicaceae bacterium 2026728 Bacteria Bacteria 60.1 3.8e-9   NR MDD2982808.1 2026728 g7201 i0 85.3 1.67755102040816 34 5 41.6 0 2 103 99 132 MDD2982808.1 DUF1573 domain-containing protein [Crocinitomicaceae bacterium] diamond 411 60.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Crocinitomicaceae   Crocinitomicaceae bacterium
27245353 27245353 PRJNA898105_P_NODE_6323_length_250_cov_0.870056_g6123_i0 PRJNA898105 6323 250 0.870056 2.17514 Phocaeicola abscessus 555313 Bacteria Bacteria 158 1.2299999999999996e-43   NR WP_019208349.1 555313 g6123 i0 100 0.996 83 0 99.6 0 2 250 72 154 WP_019208349.1 ABC transporter ATP-binding protein [Phocaeicola abscessus] diamond 249 158 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola abscessus
27340354 27340354 PRJNA898105_P_NODE_4103_length_287_cov_1.439252_g3903_i0 PRJNA898105 4103 287 1.439252 4.13065324 Alloprevotella sp. 1872471 Bacteria Bacteria 199 1.0999999999999999e-58   NR MBF0965001.1 1872471 g3903 i0 100 1.98606271777003 95 0 99.3 0 3 287 495 589 MBF0965001.1 hypothetical protein [Alloprevotella sp.] diamond 570 199 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella Alloprevotella sp.
27876990 27876990 PRJNA898105_P_NODE_5365_length_265_cov_1.604167_g5165_i0 PRJNA898105 5365 265 1.604167 4.25104255 Hallella colorans 1703337 Bacteria Bacteria 139 4.029999999999999e-40   NR WP_116615627.1 1703337 g5165 i0 100 0.735849056603774 65 0 73.6 0 3 197 72 136 WP_116615627.1 secondary thiamine-phosphate synthase enzyme YjbQ [Hallella colorans] diamond 195 139 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hallella Hallella colorans
28603308 28603308 PRJNA898105_P_NODE_5207_length_268_cov_1.558974_g5007_i0 PRJNA898105 5207 268 1.558974 4.17805032 Phocaeicola coprocola 310298 Bacteria Bacteria 46.2 0.00227   NR WP_302562358.1 310298 g5007 i0 80.8 0.582089552238806 26 5 29.1 0 2 79 191 216 WP_302562358.1 dihydroorotate dehydrogenase, partial [Phocaeicola coprocola] diamond 156 46.2 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola coprocola
28603310 28603310 PRJNA898105_P_NODE_7347_length_246_cov_0.890173_g7147_i0 PRJNA898105 7347 246 0.890173 2.18982558 Ferruginibacter sp. 1940288 Bacteria Bacteria 142 1.5e-38   NR MEP7237605.1 1940288 g7147 i0 90.1 4.9390243902439 81 8 98.8 0 3 245 9 89 MEP7237605.1 DUF1015 family protein [Ferruginibacter sp.] diamond 1215 142 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Ferruginibacter Ferruginibacter sp.
28698116 28698116 PRJNA898105_P_NODE_7687_length_244_cov_0.900585_g7487_i0 PRJNA898105 7687 244 0.900585 2.1974274 Hallella colorans 1703337 Bacteria Bacteria 80.5 1.48e-15   NR WP_116616419.1 1703337 g7487 i0 100 0.491803278688525 40 0 49.2 0 1 120 356 395 WP_116616419.1 glycine C-acetyltransferase [Hallella colorans] diamond 120 80.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hallella Hallella colorans
28894926 28894926 PRJNA898105_P_NODE_7588_length_244_cov_2.672515_g7388_i0 PRJNA898105 7588 244 2.672515 6.5209366 Bacteroidota 976 Bacteria Bacteria 155 8.77e-45   NR WP_045971217.1 1603293 g7388 i0 93.8 5.97540983606557 81 5 99.6 0 244 2 166 246 WP_045971217.1 aspartate carbamoyltransferase catalytic subunit [Flavobacterium sp. 316] diamond 1458 156 0.993589743589744 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. 316
29550243 29550243 PRJNA898105_P_NODE_6290_length_250_cov_1.480226_g6090_i0 PRJNA898105 6290 250 1.480226 3.700565 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 165 7.039999999999998e-47   NR MBK7557065.1 1869212 g6090 i0 92.7 1.968 82 6 98.4 0 248 3 259 340 MBK7557065.1 RagB/SusD family nutrient uptake outer membrane protein [Chitinophagaceae bacterium] diamond 492 165 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
29676380 29676380 PRJNA898105_P_NODE_6170_length_251_cov_0.865169_g5970_i0 PRJNA898105 6170 251 0.865169 2.17157419 Prevotella sp. S7-1-8 1284775 Bacteria Bacteria 145 1.05e-39   NR WP_036893653.1 1284775 g5970 i0 95.8 1.69721115537849 71 3 84.9 0 1 213 349 419 WP_036893653.1 MFS transporter [Prevotella sp. S7-1-8] diamond 426 145 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella sp. S7-1-8
29676381 29676381 PRJNA898105_P_NODE_6690_length_249_cov_0.875000_g6490_i0 PRJNA898105 6690 249 0.875 2.17875 Sphingobacterium nematocida 1513896 Bacteria Bacteria 181 2.64e-56   NR WP_079640796.1 1513896 g6490 i0 98.8 0.987951807228916 82 1 98.8 0 3 248 44 125 WP_079640796.1 thioredoxin family protein [Sphingobacterium nematocida] diamond 246 181 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Sphingobacterium Sphingobacterium nematocida
29707865 29707865 PRJNA898105_P_NODE_8170_length_242_cov_0.911243_g7970_i0 PRJNA898105 8170 242 0.911243 2.20520806 Bacteroidales bacterium 2030927 Bacteria Bacteria 119 4.2e-29   NR MCI6278966.1 2030927 g7970 i0 69.6 4.89669421487603 79 24 97.9 0 238 2 154 232 MCI6278966.1 insulinase family protein [Bacteroidales bacterium] diamond 1185 119 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
29929535 29929535 PRJNA898105_P_NODE_4091_length_287_cov_1.710280_g3891_i0 PRJNA898105 4091 287 1.71028 4.9085036 uncultured Hymenobacter sp. 170016 Bacteria Bacteria 128 6.63e-33   NR WP_375416031.1 170016 g3891 i0 78.9 0.794425087108014 76 16 79.4 0 59 286 29 104 WP_375416031.1 hypothetical protein [uncultured Hymenobacter sp.] diamond 228 128 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Hymenobacteraceae Hymenobacter uncultured Hymenobacter sp.
30182035 30182035 PRJNA898105_P_NODE_6372_length_250_cov_0.870056_g6172_i0 PRJNA898105 6372 250 0.870056 2.17514 Epilithonimonas zeae 1416779 Bacteria Bacteria 162 4.88e-47   NR WP_248877587.1 1416779 g6172 i0 96.3 1.968 82 3 98.4 0 3 248 90 171 WP_248877587.1 N-acetylmuramoyl-L-alanine amidase [Epilithonimonas zeae] diamond 492 162 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Epilithonimonas Epilithonimonas zeae
30284976 30284976 PRJNA898105_P_NODE_6192_length_251_cov_0.865169_g5992_i0 PRJNA898105 6192 251 0.865169 2.17157419 Flavobacterium 237 Bacteria Bacteria 79.7 7.15e-17   NR WP_039108245.1 1423323 g5992 i0 59 1.45816733067729 61 25 72.9 0 249 67 70 130 WP_039108245.1 hypothetical protein [Flavobacterium sp. AED] diamond 366 79.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. AED
30655988 30655988 PRJNA898105_P_NODE_7893_length_243_cov_0.905882_g7693_i0 PRJNA898105 7893 243 0.905882 2.20129326 uncultured Algoriphagus sp. 417365 Bacteria Bacteria 102 6.07e-26   NR WP_339879276.1 417365 g7693 i0 96.4 0.691358024691358 56 2 69.1 0 170 3 1 56 WP_339879276.1 hypothetical protein [uncultured Algoriphagus sp.] diamond 168 102 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cyclobacteriaceae Algoriphagus uncultured Algoriphagus sp.
30687535 30687535 PRJNA898105_P_NODE_5433_length_264_cov_1.586387_g5233_i0 PRJNA898105 5433 264 1.586387 4.18806168 Bacteroidota bacterium 1898104 Bacteria Bacteria 124 3.1999999999999993e-31   NR HEY4643384.1 1898104 g5233 i0 70.1 1.96590909090909 87 26 98.9 0 1 261 252 338 HEY4643384.1 anti-CBASS Acb1 family protein [Bacteroidota bacterium] diamond 519 124 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
30972132 30972132 PRJNA898105_P_NODE_8234_length_241_cov_1.488095_g8034_i0 PRJNA898105 8234 241 1.488095 3.58630895 Flavobacterium sp. J372 2898436 Bacteria Bacteria 154 5.73e-43   NR WP_257868525.1 2898436 g8034 i0 97.5 0.995850622406639 80 2 99.6 0 1 240 272 351 WP_257868525.1 TolC family protein [Flavobacterium sp. J372] diamond 240 154 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. J372
31319635 31319635 PRJNA898105_P_NODE_5355_length_265_cov_2.380208_g5155_i0 PRJNA898105 5355 265 2.380208 6.3075512 Hallella colorans 1703337 Bacteria Bacteria 154 6.259999999999998e-42   NR WP_116616881.1 1703337 g5155 i0 100 0.99622641509434 88 0 99.6 0 264 1 63 150 WP_116616881.1 DUF4954 family protein [Hallella colorans] diamond 264 154 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hallella Hallella colorans
31509637 31509637 PRJNA898105_P_NODE_4376_length_283_cov_1.214286_g4176_i0 PRJNA898105 4376 283 1.214286 3.43642938 Porphyromonas sp. HMSC 1924944 Bacteria Bacteria 191 1.5699999999999996e-55   NR WP_070467200.1 1739394 g4176 i0 98.9 0.996466431095406 94 1 99.6 0 282 1 358 451 WP_070467200.1 ABC transporter ATP-binding protein [Porphyromonas sp. HMSC065F10] diamond 282 191 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas Porphyromonas sp. HMSC065F10
31770133 31770133 PRJNA898105_P_NODE_8297_length_241_cov_0.916667_g8097_i0 PRJNA898105 8297 241 0.916667 2.20916747 Prevotellaceae 171552 Bacteria Bacteria 95.9 4.4899999999999997e-23   NR KGF17026.1 1284775 g8097 i0 97.9 1.19502074688797 48 1 59.8 0 186 43 102 149 KGF17026.1 hypothetical protein HMPREF1640_08315 [Prevotella sp. S7-1-8] diamond 288 95.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella sp. S7-1-8
31991560 31991560 PRJNA898105_P_NODE_6518_length_249_cov_1.346591_g6318_i0 PRJNA898105 6518 249 1.346591 3.35301159 Flavobacterium 237 Bacteria Bacteria 125 1.11e-32   NR WP_144218829.1 237 g6318 i0 67.1 2.90361445783133 82 27 98.8 0 247 2 109 190 WP_144218829.1 MULTISPECIES: BT4734/BF3469 family protein [Flavobacterium] diamond 723 126 0.992063492063492 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium  
32110556 32110556 PRJNA898105_P_NODE_5238_length_268_cov_1.215385_g5038_i0 PRJNA898105 5238 268 1.215385 3.2572318 Hallella colorans 1703337 Bacteria Bacteria 171 8.18e-49   NR WP_116616102.1 1703337 g5038 i0 96.6 0.996268656716418 89 3 99.6 0 267 1 328 416 WP_116616102.1 ComEC/Rec2 family competence protein [Hallella colorans] diamond 267 171 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hallella Hallella colorans
32522129 32522129 PRJNA898105_P_NODE_7099_length_247_cov_0.885057_g6899_i0 PRJNA898105 7099 247 0.885057 2.18609079 uncultured Porphyromonas sp. 159274 Bacteria Bacteria 139 5.219999999999999e-37   NR WP_296163501.1 159274 g6899 i0 98.4 0.753036437246964 62 1 75.3 0 247 62 413 474 WP_296163501.1 Gfo/Idh/MocA family protein [uncultured Porphyromonas sp.] diamond 186 139 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas uncultured Porphyromonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;