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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA898105" and tax_phylum = "Bacillota"

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tax_superkingdom 1

tax_phylum 1

  • Bacillota · 29 ✖

tax_kingdom 1

bioproject 1

  • PRJNA898105 · 29 ✖

analysis 1

  • diamond · 29 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13627653 13627653 PRJNA898105_P_NODE_8351_length_241_cov_0.916667_g8151_i0 PRJNA898105 8351 241 0.916667 2.20916747 Alloiococcus otitis 1652 Bacteria Bacteria 120 1.27e-30   NR WP_003776677.1 1652 g8151 i0 87.5 0.995850622406639 80 10 99.6 0 1 240 64 143 WP_003776677.1 molecular chaperone DnaJ [Alloiococcus otitis] diamond 240 120 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Carnobacteriaceae Alloiococcus Alloiococcus otitis
18725302 18725302 PRJNA898105_P_NODE_6915_length_247_cov_2.500000_g6715_i0 PRJNA898105 6915 247 2.5 6.175 Anaerococcus murdochii 411577 Bacteria Bacteria 141 1.27e-41   NR WP_223418707.1 411577 g6715 i0 94.7 0.910931174089069 75 4 91.1 0 246 22 36 110 WP_223418707.1 PTS lactose/cellobiose transporter subunit IIA [Anaerococcus murdochii] diamond 225 141 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Anaerococcus Anaerococcus murdochii
20000452 20000452 PRJNA898105_P_NODE_5916_length_254_cov_1.563536_g5716_i0 PRJNA898105 5916 254 1.563536 3.97138144 Urinicoccus timonensis 2024205 Bacteria Bacteria 173 3.9099999999999996e-48   NR WP_034437657.1 2024205 g5716 i0 100 0.992125984251969 84 0 99.2 0 3 254 803 886 WP_034437657.1 preprotein translocase subunit SecA [Urinicoccus timonensis] diamond 252 173 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Urinicoccus Urinicoccus timonensis
20370535 20370535 PRJNA898105_P_NODE_4236_length_285_cov_1.452830_g4036_i0 PRJNA898105 4236 285 1.45283 4.1405655 Peptoniphilus 162289 Bacteria Bacteria 164 4.12e-49   NR MDU1177054.1 54005 g4036 i0 94.7 4 95 5 100 0 1 285 84 178 MDU1177054.1 30S ribosomal protein S3 [Peptoniphilus harei] diamond 1140 165 0.993939393939394 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Peptoniphilus Peptoniphilus harei
21275776 21275776 PRJNA898105_P_NODE_3937_length_290_cov_1.317972_g3737_i0 PRJNA898105 3937 290 1.317972 3.8221188 root 1 Root_unresolved Root_unresolved 170 7.36e-48   NR HPT61047.1 1879010 g3737 i0 83.3 9.93103448275862 96 16 99.3 0 288 1 236 331 HPT61047.1 terminase large subunit [Bacillota bacterium] diamond 2880 170 1 Bacteria   Bacillati Bacillota         Bacillota bacterium
21275817 21275817 PRJNA898105_P_NODE_7437_length_245_cov_0.895349_g7237_i0 PRJNA898105 7437 245 0.895349 2.19360505 Peptoniphilus lacrimalis 33031 Bacteria Bacteria 135 3.83e-36   NR WP_019035062.1 33031 g7237 i0 86.4 0.991836734693878 81 11 99.2 0 245 3 66 146 WP_019035062.1 ATP-dependent Clp protease ATP-binding subunit ClpX [Peptoniphilus lacrimalis] diamond 243 135 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Peptoniphilus Peptoniphilus lacrimalis
26897669 26897669 PRJNA898105_P_NODE_6361_length_250_cov_0.870056_g6161_i0 PRJNA898105 6361 250 0.870056 2.17514 Urinicoccus timonensis 2024205 Bacteria Bacteria 160 1.2299999999999996e-43   NR WP_099208954.1 2024205 g6161 i0 96.4 0.996 83 3 99.6 0 1 249 794 876 WP_099208954.1 insulinase family protein [Urinicoccus timonensis] diamond 249 160 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Urinicoccus Urinicoccus timonensis
27118713 27118713 PRJNA898105_P_NODE_5142_length_270_cov_1.045685_g4942_i0 PRJNA898105 5142 270 1.045685 2.8233495 Alloiococcus sp. 1872467 Bacteria Bacteria 144 2.1799999999999996e-41   NR HLQ74434.1 1872467 g4942 i0 89.8 0.977777777777778 88 9 97.8 0 6 269 4 91 HLQ74434.1 ABC transporter permease [Alloiococcus sp.] diamond 264 144 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Carnobacteriaceae Alloiococcus Alloiococcus sp.
27372139 27372139 PRJNA898105_P_NODE_8163_length_242_cov_0.911243_g7963_i0 PRJNA898105 8163 242 0.911243 2.20520806 Alterileibacterium massiliense 1870997 Bacteria Bacteria 153 3.85e-46   NR WP_071132431.1 1870997 g7963 i0 98.8 0.991735537190083 80 1 99.2 0 2 241 3 82 WP_071132431.1 metal-dependent transcriptional regulator [Alterileibacterium massiliense] diamond 240 153 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Alterileibacterium Alterileibacterium massiliense
28413867 28413867 PRJNA898105_P_NODE_7066_length_247_cov_0.885057_g6866_i0 PRJNA898105 7066 247 0.885057 2.18609079 Tissierellia bacterium 2049431 Bacteria Bacteria 73.9 2e-13   NR MDO5026771.1 2049431 g6866 i0 92.5 0.48582995951417 40 3 48.6 0 128 247 1 40 MDO5026771.1 RNA-binding cell elongation regulator Jag/EloR [Tissierellia bacterium] diamond 120 73.9 1 Bacteria   Bacillati Bacillota Tissierellia       Tissierellia bacterium
28540310 28540310 PRJNA898105_P_NODE_6767_length_248_cov_1.211429_g6567_i0 PRJNA898105 6767 248 1.211429 3.00434392 Blautia stercoris 871664 Bacteria Bacteria 127 3.61e-35   NR WP_187559071.1 871664 g6567 i0 100 0.798387096774194 66 0 79.8 0 248 51 121 186 WP_187559071.1 signal peptidase I [Blautia stercoris] diamond 198 127 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia stercoris
28603309 28603309 PRJNA898105_P_NODE_6527_length_249_cov_1.079545_g6327_i0 PRJNA898105 6527 249 1.079545 2.68806705 Staphylococcus saprophyticus 29385 Bacteria Bacteria 163 3.2399999999999998e-46   NR WP_145460714.1 29385 g6327 i0 100 1 83 0 100 0 1 249 164 246 WP_145460714.1 NAD(P)-binding domain-containing protein [Staphylococcus saprophyticus] diamond 249 163 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus saprophyticus
28823945 28823945 PRJNA898105_P_NODE_4108_length_287_cov_1.406542_g3908_i0 PRJNA898105 4108 287 1.406542 4.03677554 Paenibacillus lautus 1401 Bacteria Bacteria 121 4.649999999999999e-31   NR WP_251494184.1 1401 g3908 i0 65.5 1.75609756097561 84 29 87.8 0 35 286 27 110 WP_251494184.1 hypothetical protein [Paenibacillus lautus] diamond 504 121 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus lautus
29171675 29171675 PRJNA898105_P_NODE_5549_length_262_cov_1.248677_g5349_i0 PRJNA898105 5549 262 1.248677 3.27153374 Evtepia sp. 2773933 Bacteria Bacteria 168 4.129999999999999e-48   NR WP_330004511.1 2773933 g5349 i0 97.7 0.99618320610687 87 2 99.6 0 261 1 344 430 WP_330004511.1 glutamate synthase subunit beta [Evtepia sp.] diamond 261 168 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales   Evtepia Evtepia sp.
29581657 29581657 PRJNA898105_P_NODE_6630_length_249_cov_0.875000_g6430_i0 PRJNA898105 6630 249 0.875 2.17875 Alloiococcus otitis 1652 Bacteria Bacteria 86.7 2.96e-18   NR WP_003778500.1 1652 g6430 i0 95.3 0.518072289156627 43 2 51.8 0 111 239 241 283 WP_003778500.1 Rgg/GadR/MutR family transcriptional regulator [Alloiococcus otitis] diamond 129 86.7 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Carnobacteriaceae Alloiococcus Alloiococcus otitis
29644738 29644738 PRJNA898105_P_NODE_6970_length_247_cov_0.885057_g6770_i0 PRJNA898105 6970 247 0.885057 2.18609079 Atopostipes sp. 1872652 Bacteria Bacteria 140 8.389999999999999e-38   NR HLR91885.1 1872652 g6770 i0 87.8 0.995951417004049 82 10 99.6 0 246 1 10 91 HLR91885.1 branched-chain amino acid transport system II carrier protein [Atopostipes sp.] diamond 246 140 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Carnobacteriaceae Atopostipes Atopostipes sp.
29739606 29739606 PRJNA898105_P_NODE_3850_length_292_cov_1.926941_g3650_i0 PRJNA898105 3850 292 1.926941 5.62666772 Ezakiella massiliensis 1852374 Bacteria Bacteria 152 1.03e-42   NR WP_075573803.1 1852374 g3650 i0 75 1.89041095890411 92 23 94.5 0 291 16 273 364 WP_075573803.1 hypothetical protein [Ezakiella massiliensis] diamond 552 152 1 Bacteria   Bacillati Bacillota Tissierellia     Ezakiella Ezakiella massiliensis
30182033 30182033 PRJNA898105_P_NODE_4112_length_287_cov_1.322430_g3912_i0 PRJNA898105 4112 287 1.32243 3.7953741 Peptoniphilus catoniae 1660341 Bacteria Bacteria 145 2.88e-40   NR WP_138160363.1 1660341 g3912 i0 74.7 0.993031358885017 95 24 99.3 0 285 1 166 260 WP_138160363.1 phosphoribosylformylglycinamidine cyclo-ligase [Peptoniphilus catoniae] diamond 285 145 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Peptoniphilus Peptoniphilus catoniae
30340655 30340655 PRJNA898105_P_NODE_6832_length_248_cov_0.880000_g6632_i0 PRJNA898105 6832 248 0.88 2.1824 Peptoniphilus grossensis 1465756 Bacteria Bacteria 65.9 8.83e-12   NR WP_412261395.1 1465756 g6632 i0 97.1 0.423387096774194 35 1 42.3 0 1 105 43 77 WP_412261395.1 DNA-directed RNA polymerase subunit omega [Peptoniphilus grossensis] diamond 105 65.9 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Peptoniphilus Peptoniphilus grossensis
30561007 30561007 PRJNA898105_P_NODE_7833_length_243_cov_0.905882_g7633_i0 PRJNA898105 7833 243 0.905882 2.20129326 Lacicoccus qingdaonensis 576118 Bacteria Bacteria 141 8.54e-37   NR WP_092983687.1 576118 g7633 i0 97.5 0.987654320987654 80 2 98.8 0 2 241 296 375 WP_092983687.1 chromosome segregation protein SMC [Lacicoccus qingdaonensis] diamond 240 141 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Salinicoccaceae Lacicoccus Lacicoccus qingdaonensis
30624286 30624286 PRJNA898105_P_NODE_5033_length_271_cov_2.484848_g4833_i0 PRJNA898105 5033 271 2.484848 6.73393808 Aliicoccus persicus 930138 Bacteria Bacteria 172 1.6999999999999998e-49   NR WP_091475747.1 930138 g4833 i0 100 0.996309963099631 90 0 99.6 0 270 1 66 155 WP_091475747.1 nicotinate phosphoribosyltransferase [Aliicoccus persicus] diamond 270 172 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Aliicoccus Aliicoccus persicus
30853277 30853277 PRJNA898105_P_NODE_8354_length_241_cov_0.916667_g8154_i0 PRJNA898105 8354 241 0.916667 2.20916747 Anaerococcus 165779 Bacteria Bacteria 55.5 1.13e-6   NR WP_044566626.1 938293 g8154 i0 46.9 1.20746887966805 49 26 61 0 241 95 302 350 WP_044566626.1 hypothetical protein [Anaerococcus provencensis] diamond 291 55.5 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Anaerococcus Anaerococcus provencensis
31635899 31635899 PRJNA898105_P_NODE_7396_length_245_cov_1.790698_g7196_i0 PRJNA898105 7396 245 1.790698 4.3872101 Aedoeadaptatus coli 2058292 Bacteria Bacteria 149 8.82e-40   NR WP_108830712.1 2058292 g7196 i0 92.6 0.991836734693878 81 6 99.2 0 3 245 247 327 WP_108830712.1 transketolase [Aedoeadaptatus coli] diamond 243 149 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Aedoeadaptatus Aedoeadaptatus coli
31643470 31643470 PRJNA898105_P_NODE_8036_length_242_cov_1.443787_g7836_i0 PRJNA898105 8036 242 1.443787 3.49396454 Bacillota 1239 Bacteria Bacteria 133 1.22e-34   NR HEN0393049.1 1311 g7836 i0 100 2.3801652892562 64 0 79.3 0 2 193 247 310 HEN0393049.1 hypothetical protein [Streptococcus agalactiae] diamond 576 133 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus agalactiae
31667520 31667520 PRJNA898105_P_NODE_6357_length_250_cov_0.870056_g6157_i0 PRJNA898105 6357 250 0.870056 2.17514 Aliicoccus persicus 930138 Bacteria Bacteria 135 1.14e-36   NR WP_091474752.1 930138 g6157 i0 89 0.984 82 9 98.4 0 248 3 150 231 WP_091474752.1 ABC transporter substrate-binding protein [Aliicoccus persicus] diamond 246 135 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Aliicoccus Aliicoccus persicus
31730741 31730741 PRJNA898105_P_NODE_6137_length_251_cov_0.865169_g5937_i0 PRJNA898105 6137 251 0.865169 2.17157419 Peptoniphilaceae bacterium 1891242 Bacteria Bacteria 151 7.47e-41   NR MCI6660489.1 1891242 g5937 i0 88 3.9681274900398402 83 10 99.2 0 251 3 381 463 MCI6660489.1 V-type ATP synthase subunit A [Peptoniphilaceae bacterium] diamond 996 151 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae   Peptoniphilaceae bacterium
31762422 31762422 PRJNA898105_P_NODE_7017_length_247_cov_0.885057_g6817_i0 PRJNA898105 7017 247 0.885057 2.18609079 Alloiococcus otitis 1652 Bacteria Bacteria 163 1.9099999999999998e-47   NR WP_003778570.1 1652 g6817 i0 100 0.995951417004049 82 0 99.6 0 2 247 132 213 WP_003778570.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Alloiococcus otitis] diamond 246 163 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Carnobacteriaceae Alloiococcus Alloiococcus otitis
31825591 31825591 PRJNA898105_P_NODE_8337_length_241_cov_0.916667_g8137_i0 PRJNA898105 8337 241 0.916667 2.20916747 Clostridiales bacterium 1898207 Bacteria Bacteria 172 4.22e-49   NR MCI6602839.1 1898207 g8137 i0 98.8 0.995850622406639 80 1 99.6 0 2 241 332 411 MCI6602839.1 tryptophanase [Clostridiales bacterium] diamond 240 172 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Clostridiales bacterium
32836845 32836845 PRJNA898105_P_NODE_4240_length_285_cov_1.448113_g4040_i0 PRJNA898105 4240 285 1.448113 4.12712205 Eubacteriales bacterium 2831996 Bacteria Bacteria 48.1 7.13e-4   NR MEZ4357688.1 2831996 g4040 i0 40.4 0.6 57 26 51.6 1 160 14 279 335 MEZ4357688.1 SDR family oxidoreductase [Eubacteriales bacterium] diamond 171 48.1 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Eubacteriales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;