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contig_metadata

36 rows where analysis = "diamond", bioproject = "PRJNA897077" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 36 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA897077 · 36 ✖

analysis 1

  • diamond · 36 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5976986 5976986 PRJNA897077_P_NODE_2065_length_666_cov_0.883642_g1939_i0 PRJNA897077 2065 666 0.883642 5.88505572 Metazoa 33208 Chordata Chordata 300 9.93e-98   NR CAI5782936.1 74358 g1939 i0 65.3 12.9594594594595 222 74 99.5 2 665 3 55 274 CAI5782936.1 6-phosphogluconate dehydrogenase, decarboxylating [Podarcis lilfordi] diamond 8631 300 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Lacertidae Podarcis Podarcis lilfordi
19095707 19095707 PRJNA897077_P_NODE_6475_length_382_cov_1.514563_g6348_i0 PRJNA897077 6475 382 1.514563 5.78563066 Mammalia 40674 Chordata Chordata 146 1.3e-40   NR KAF0873532.1 9678 g6348 i0 50.4 6.98167539267016 127 61 99 2 380 3 102 227 KAF0873532.1 CHRD1 protein, partial [Crocuta crocuta] diamond 2667 147 0.993197278911565 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Hyaenidae Crocuta Crocuta crocuta
26778695 26778695 PRJNA897077_P_NODE_18581_length_245_cov_0.906977_g18454_i0 PRJNA897077 18581 245 0.906977 2.22209365 Chordata 7711 Chordata Chordata 72 1.74e-12   NR XP_032819247.1 7757 g18454 i0 60.3 3.51428571428571 73 29 89.4 0 1 219 294 366 XP_032819247.1 adiponectin receptor protein 1-like isoform X1 [Petromyzon marinus] diamond 861 72 1 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Petromyzon Petromyzon marinus
26960637 26960637 PRJNA897077_P_NODE_2102_length_661_cov_1.061224_g1976_i0 PRJNA897077 2102 661 1.061224 7.01469064 Pogona vitticeps 103695 Chordata Chordata 60.8 8.56e-7   NR XP_020638850.1 103695 g1976 i0 33 0.508320726172466 112 59 43.6 4 365 78 33 144 XP_020638850.1 E3 ubiquitin-protein ligase TRIM56-like [Pogona vitticeps] diamond 336 60.8 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Agamidae Pogona Pogona vitticeps
27474247 27474247 PRJNA897077_P_NODE_19183_length_243_cov_2.170588_g19056_i0 PRJNA897077 19183 243 2.170588 5.27452884 Metazoa 33208 Chordata Chordata 59.7 3.99e-8   NR XP_035677237.1 7739 g19056 i0 41.9 10.9259259259259 62 34 74.1 1 2 181 1426 1487 XP_035677237.1 cadherin EGF LAG seven-pass G-type receptor 2-like [Branchiostoma floridae] diamond 2655 59.7 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma floridae
27505988 27505988 PRJNA897077_P_NODE_7303_length_361_cov_1.083333_g7176_i0 PRJNA897077 7303 361 1.083333 3.91083213 Metazoa 33208 Chordata Chordata 47 0.00458   NR XP_042330547.1 8520 g7176 i0 63.3 1.60387811634349 30 11 24.9 0 95 6 80 109 XP_042330547.1 eukaryotic translation initiation factor 2-alpha kinase 3 isoform X1 [Sceloporus undulatus] diamond 579 47 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Phrynosomatidae Sceloporus Sceloporus undulatus
27727219 27727219 PRJNA897077_P_NODE_17484_length_248_cov_0.891429_g17357_i0 PRJNA897077 17484 248 0.891429 2.21074392 Chordata 7711 Chordata Chordata 45.8 0.00332   NR XP_053164910.1 884348 g17357 i0 36.1 2.06854838709677 72 40 87.1 2 217 2 56 121 XP_053164910.1 uncharacterized protein LOC128350518 [Hemicordylus capensis] diamond 513 45.8 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Cordylidae Hemicordylus Hemicordylus capensis
27971686 27971686 PRJNA897077_P_NODE_17285_length_248_cov_0.891429_g17158_i0 PRJNA897077 17285 248 0.891429 2.21074392 Ochotona princeps 9978 Chordata Chordata 46.2 0.00221   NR XP_058536338.1 9978 g17158 i0 42.9 1.68145161290323 42 24 50.8 0 209 84 136 177 XP_058536338.1 brain-specific serine protease 4 [Ochotona princeps] diamond 417 46.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Lagomorpha Ochotonidae Ochotona Ochotona princeps
27971689 27971689 PRJNA897077_P_NODE_2945_length_561_cov_24.206967_g2818_i0 PRJNA897077 2945 561 24.206967 135.80108487 Branchiostoma belcheri 7741 Chordata Chordata 130 7.95e-35   NR XP_019626026.1 7741 g2818 i0 45.5 1.50267379679144 132 71 70.6 1 483 88 18 148 XP_019626026.1 PREDICTED: epididymal secretory protein E1-like [Branchiostoma belcheri] diamond 843 130 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma belcheri
28137446 28137446 PRJNA897077_P_NODE_19765_length_242_cov_0.923077_g19638_i0 PRJNA897077 19765 242 0.923077 2.23384634 Chordata 7711 Chordata Chordata 101 7.009999999999999e-23   NR XP_055522199.1 7782 g19638 i0 100 138.04958677686 48 0 59.5 0 241 98 3671 3718 XP_055522199.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HUWE1 [Leucoraja erinaceus] diamond 33408 101 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Rajiformes Rajidae Leucoraja Leucoraja erinaceus
28192501 28192501 PRJNA897077_P_NODE_10606_length_304_cov_0.978355_g10479_i0 PRJNA897077 10606 304 0.978355 2.9741992 Phallusia mammillata 59560 Chordata Chordata 48.9 5.39e-4   NR CAB3267570.1 59560 g10479 i0 41.5 0.523026315789474 53 31 52.3 0 171 13 58 110 CAB3267570.1 ubiquitin carboxyl-terminal hydrolase 7-like [Phallusia mammillata] diamond 159 48.9 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Phlebobranchia Ascidiidae Phallusia Phallusia mammillata
28358128 28358128 PRJNA897077_P_NODE_11166_length_296_cov_1.291480_g11039_i0 PRJNA897077 11166 296 1.29148 3.8227808 Chondrichthyes 7777 Chordata Chordata 132 1.29e-34   NR XP_051891491.1 685728 g11039 i0 58.5 18.1216216216216 94 39 95.3 0 5 286 196 289 XP_051891491.1 aldehyde dehydrogenase, dimeric NADP-preferring-like isoform X2 [Pristis pectinata] diamond 5364 132 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Rhinopristiformes Pristidae Pristis Pristis pectinata
28358130 28358130 PRJNA897077_P_NODE_12126_length_285_cov_0.985849_g11999_i0 PRJNA897077 12126 285 0.985849 2.80966965 Aves 8782 Chordata Chordata 106 2.5999999999999996e-24   NR XP_010559492.1 52644 g11999 i0 52.6 11.2315789473684 97 43 100 2 1 285 458 553 XP_010559492.1 PREDICTED: sentrin-specific protease 2 [Haliaeetus leucocephalus] diamond 3201 107 0.990654205607477 Eukaryota Opisthokonta Metazoa Chordata Aves Accipitriformes Accipitridae Haliaeetus Haliaeetus leucocephalus
28389813 28389813 PRJNA897077_P_NODE_7986_length_346_cov_1.663004_g7859_i0 PRJNA897077 7986 346 1.663004 5.75399384 Chordata 7711 Chordata Chordata 113 2.39e-26   NR KAK9409430.1 8729 g7859 i0 94.9 12.1820809248555 59 3 51.2 0 344 168 395 453 KAK9409430.1 heat shock protein HSP 90-alpha [Crotalus adamanteus] diamond 4215 114 0.991228070175439 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Viperidae Crotalus Crotalus adamanteus
28476923 28476923 PRJNA897077_P_NODE_10586_length_304_cov_1.164502_g10459_i0 PRJNA897077 10586 304 1.164502 3.54008608 Peromyscus maniculatus bairdii 230844 Chordata Chordata 52 1.46e-6   NR ACM43285.1 230844 g10459 i0 65.9 0.434210526315789 44 14 43.4 1 72 203 4 46 ACM43285.1 tissue inhibitor of metalloproteinase 3, partial [Peromyscus maniculatus bairdii] diamond 132 52 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Cricetidae Peromyscus Peromyscus maniculatus
28610898 28610898 PRJNA897077_P_NODE_13847_length_267_cov_1.041237_g13720_i0 PRJNA897077 13847 267 1.041237 2.78010279 Metazoa 33208 Chordata Chordata 56.6 6.3e-7   NR CAG5104971.1 34765 g13720 i0 53.6 2.17977528089888 56 26 62.9 0 265 98 305 360 CAG5104971.1 Oidioi.mRNA.OKI2018_I69.chr1.g1719.t1.cds [Oikopleura dioica] diamond 582 56.6 1 Eukaryota Opisthokonta Metazoa Chordata Appendicularia Copelata Oikopleuridae Oikopleura Oikopleura dioica
29361021 29361021 PRJNA897077_P_NODE_13529_length_270_cov_1.187817_g13402_i0 PRJNA897077 13529 270 1.187817 3.2071059 Passer montanus 9160 Chordata Chordata 53.9 5.8e-6   NR XP_039564653.1 9160 g13402 i0 61.8 2.77777777777778 34 13 37.8 0 17 118 78 111 XP_039564653.1 hyaluronan-binding protein 2 isoform X2 [Passer montanus] diamond 750 53.9 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Passeridae Passer Passer montanus
29739596 29739596 PRJNA897077_P_NODE_5850_length_401_cov_1.591463_g5723_i0 PRJNA897077 5850 401 1.591463 6.38176663 Chelonoidis abingdonii 106734 Chordata Chordata 52.8 2.14e-5   NR XP_032634775.1 106734 g5723 i0 38.5 3.10473815461347 135 74 98.8 4 6 401 45 173 XP_032634775.1 pre-rRNA-processing protein TSR2 homolog [Chelonoidis abingdonii] diamond 1245 52.8 1 Eukaryota Opisthokonta Metazoa Chordata   Testudines Testudinidae Chelonoidis Chelonoidis abingdonii
30277235 30277235 PRJNA897077_P_NODE_10332_length_307_cov_1.333333_g10205_i0 PRJNA897077 10332 307 1.333333 4.09333231 Mobula hypostoma 723540 Chordata Chordata 43.1 0.0233   NR XP_062911884.1 723540 g10205 i0 63.3 0.293159609120521 30 10 29.3 1 163 252 111 139 XP_062911884.1 basic leucine zipper transcriptional factor ATF-like 3 [Mobula hypostoma] diamond 90 43.1 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Myliobatiformes Myliobatidae Mobula Mobula hypostoma
30442704 30442704 PRJNA897077_P_NODE_19413_length_243_cov_0.917647_g19286_i0 PRJNA897077 19413 243 0.917647 2.22988221 Chordata 7711 Chordata Chordata 160 6.69e-46   NR ETE65778.1 8665 g19286 i0 97.5 76.037037037037 80 2 98.8 0 2 241 266 345 ETE65778.1 Eukaryotic translation initiation factor 3 subunit E [Ophiophagus hannah] diamond 18477 161 0.993788819875776 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Elapidae Ophiophagus Ophiophagus hannah
30466782 30466782 PRJNA897077_P_NODE_18513_length_245_cov_0.906977_g18386_i0 PRJNA897077 18513 245 0.906977 2.22209365 Styela clava 7725 Chordata Chordata 48.1 2.59e-4   NR XP_039253526.1 7725 g18386 i0 39 1.43265306122449 59 33 72.2 1 220 44 11 66 XP_039253526.1 TM2 domain-containing protein 1-like [Styela clava] diamond 351 48.1 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Stolidobranchia Styelidae Styela Styela clava
30529575 30529575 PRJNA897077_P_NODE_9093_length_326_cov_1.537549_g8966_i0 PRJNA897077 9093 326 1.537549 5.01240974 Molossus molossus 27622 Chordata Chordata 159 9.43e-44   NR KAF6438719.1 27622 g8966 i0 72.2 2.98159509202454 108 30 99.4 0 3 326 368 475 KAF6438719.1 protein phosphatase 2 scaffold subunit Abeta [Molossus molossus] diamond 972 159 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Molossidae Molossus Molossus molossus
30719137 30719137 PRJNA897077_P_NODE_17054_length_249_cov_0.886364_g16927_i0 PRJNA897077 17054 249 0.886364 2.20704636 Latimeria chalumnae 7897 Chordata Chordata 169 2.6299999999999996e-47   NR XP_064423572.1 7897 g16927 i0 97.6 89 83 2 100 0 1 249 129 211 XP_064423572.1 probable ATP-dependent RNA helicase DDX5 [Latimeria chalumnae] diamond 22161 170 0.994117647058824 Eukaryota Opisthokonta Metazoa Chordata   Coelacanthiformes Coelacanthidae Latimeria Latimeria chalumnae
30719151 30719151 PRJNA897077_P_NODE_9654_length_317_cov_2.463115_g9527_i0 PRJNA897077 9654 317 2.463115 7.80807455 Erpetoichthys calabaricus 27687 Chordata Chordata 138 2.19e-37   NR XP_051791274.1 27687 g9527 i0 78.3 6.09463722397476 92 19 86.1 1 285 13 115 206 XP_051791274.1 E3 SUMO-protein ligase ZBED1-like [Erpetoichthys calabaricus] diamond 1932 138 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Erpetoichthys Erpetoichthys calabaricus
30972123 30972123 PRJNA897077_P_NODE_4194_length_472_cov_1.160401_g4067_i0 PRJNA897077 4194 472 1.160401 5.47709272 Pogona vitticeps 103695 Chordata Chordata 174 4.3700000000000003e-51   NR XP_020643664.1 103695 g4067 i0 56.1 8.0021186440678 157 68 99.8 1 1 471 11 166 XP_020643664.1 dehydrogenase/reductase SDR family member 12 isoform X3 [Pogona vitticeps] diamond 3777 174 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Agamidae Pogona Pogona vitticeps
31422227 31422227 PRJNA897077_P_NODE_19716_length_242_cov_0.923077_g19589_i0 PRJNA897077 19716 242 0.923077 2.23384634 Columbidae 8930 Chordata Chordata 85.1 4.52e-17   NR XP_064893233.1 8932 g19589 i0 69.5 2.92561983471074 59 18 73.1 0 233 57 1157 1215 XP_064893233.1 general transcription factor II-I isoform X1 [Columba livia] diamond 708 85.5 0.9953216374269 Eukaryota Opisthokonta Metazoa Chordata Aves Columbiformes Columbidae Columba Columba livia
31509624 31509624 PRJNA897077_P_NODE_5116_length_429_cov_1.741573_g4989_i0 PRJNA897077 5116 429 1.741573 7.47134817 Latimeria chalumnae 7897 Chordata Chordata 107 9.48e-24   NR XP_064415807.1 7897 g4989 i0 44.9 0.965034965034965 138 71 93.7 3 404 3 160 296 XP_064415807.1 kinesin-like protein KIF2C [Latimeria chalumnae] diamond 414 107 1 Eukaryota Opisthokonta Metazoa Chordata   Coelacanthiformes Coelacanthidae Latimeria Latimeria chalumnae
31864850 31864850 PRJNA897077_P_NODE_19557_length_243_cov_0.917647_g19430_i0 PRJNA897077 19557 243 0.917647 2.22988221 Metazoa 33208 Chordata Chordata 56.6 3.78e-7   NR XP_032830687.1 7757 g19430 i0 92.3 31.2222222222222 26 2 32.1 0 243 166 249 274 XP_032830687.1 cytochrome b-c1 complex subunit Rieske, mitochondrial [Petromyzon marinus] diamond 7587 57 0.992982456140351 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Petromyzon Petromyzon marinus
31896657 31896657 PRJNA897077_P_NODE_7397_length_359_cov_1.090909_g7270_i0 PRJNA897077 7397 359 1.090909 3.91636331 Chordata 7711 Chordata Chordata 233 5.37e-73   NR OCT77782.1 8355 g7270 i0 98.3 30.8272980501393 119 2 99.4 0 357 1 76 194 OCT77782.1 hypothetical protein XELAEV_18028877mg [Xenopus laevis] diamond 11067 234 0.995726495726496 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pipidae Xenopus Xenopus laevis
32023305 32023305 PRJNA897077_P_NODE_18418_length_245_cov_1.360465_g18291_i0 PRJNA897077 18418 245 1.360465 3.33313925 Chordata 7711 Chordata Chordata 103 8.809999999999999e-24   NR NP_001079510.1 8355 g18291 i0 67.6 23.2775510204082 74 24 90.6 0 23 244 231 304 NP_001079510.1 RNA exonuclease 4 [Xenopus laevis] diamond 5703 104 0.990384615384615 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pipidae Xenopus Xenopus laevis
32118313 32118313 PRJNA897077_P_NODE_2958_length_561_cov_1.625000_g2831_i0 PRJNA897077 2958 561 1.625 9.11625 Metazoa 33208 Chordata Chordata 48.9 0.00495   NR NP_001005036.1 8364 g2831 i0 63.3 1.41176470588235 30 11 16 0 48 137 412 441 NP_001005036.1 vasorin precursor [Xenopus tropicalis] diamond 792 49.3 0.991886409736308 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pipidae Xenopus Xenopus tropicalis
32174010 32174010 PRJNA897077_P_NODE_11978_length_286_cov_1.741784_g11851_i0 PRJNA897077 11978 286 1.741784 4.98150224 Peucedramus taeniatus 135441 Chordata Chordata 45.1 0.00972   NR NXQ12103.1 135441 g11851 i0 35.6 0.765734265734266 73 44 73.4 2 19 228 319 391 NXQ12103.1 TDRD1 protein [Peucedramus taeniatus] diamond 219 45.1 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Fringillidae Peucedramus Peucedramus taeniatus
32213215 32213215 PRJNA897077_P_NODE_5818_length_402_cov_3.933131_g5691_i0 PRJNA897077 5818 402 3.933131 15.81118662 Chordata 7711 Chordata Chordata 124 3.01e-32   NR XP_042308365.1 8520 g5691 i0 59.8 2.36567164179104 102 36 72.4 1 111 401 42 143 XP_042308365.1 selenide, water dikinase 2-like [Sceloporus undulatus] diamond 951 125 0.992 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Phrynosomatidae Sceloporus Sceloporus undulatus
32466498 32466498 PRJNA897077_P_NODE_18939_length_244_cov_0.912281_g18812_i0 PRJNA897077 18939 244 0.912281 2.22596564 Chordata 7711 Chordata Chordata 138 6.47e-36   NR OXB75009.1 9014 g18812 i0 98.8 9.95901639344262 81 1 99.6 0 243 1 16 96 OXB75009.1 hypothetical protein H355_001416, partial [Colinus virginianus] diamond 2430 138 1 Eukaryota Opisthokonta Metazoa Chordata Aves Galliformes Odontophoridae Colinus Colinus virginianus
32742590 32742590 PRJNA897077_P_NODE_1240_length_848_cov_1.383226_g1136_i0 PRJNA897077 1240 848 1.383226 11.72975648 Oryctolagus cuniculus 9986 Chordata Chordata 83.2 6.9e-14   NR XP_002720903.2 9986 g1136 i0 30.4 2.25353773584906 191 119 65.4 2 777 223 103 285 XP_002720903.2 uncharacterized protein [Oryctolagus cuniculus] diamond 1911 83.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Lagomorpha Leporidae Oryctolagus Oryctolagus cuniculus
32844506 32844506 PRJNA897077_P_NODE_14480_length_260_cov_1.016043_g14353_i0 PRJNA897077 14480 260 1.016043 2.6417118 Aves 8782 Chordata Chordata 166 2.6999999999999998e-48   NR XP_035759046.1 188379 g14353 i0 94.2 38.6192307692308 86 5 99.2 0 260 3 261 346 XP_035759046.1 60S ribosomal protein L3 [Egretta garzetta] diamond 10041 167 0.994011976047904 Eukaryota Opisthokonta Metazoa Chordata Aves Pelecaniformes Ardeidae Egretta Egretta garzetta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;