RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA897077" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA897077 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27876974 27876974 PRJNA897077_P_NODE_17685_length_247_cov_0.896552_g17558_i0 PRJNA897077 17685 247 0.896552 2.21448344 Mycena citricolor 2018698 Fungi Fungi 44.7 0.00842   NR CAK5275291.1 2018698 g17558 i0 41.5 0.497975708502024 41 21 46.2 1 113 226 179 219 CAK5275291.1 unnamed protein product [Mycena citricolor] diamond 123 44.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena citricolor
31928300 31928300 PRJNA897077_P_NODE_13397_length_271_cov_1.525253_g13270_i0 PRJNA897077 13397 271 1.525253 4.13343563 Eukaryota 2759 Fungi Fungi 43.9 0.00943   NR OJA14410.1 180088 g13270 i0 42.9 3.85239852398524 49 28 54.2 0 222 76 65 113 OJA14410.1 hypothetical protein AZE42_07674 [Rhizopogon vesiculosus] diamond 1044 43.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales Rhizopogonaceae Rhizopogon Rhizopogon vesiculosus
32742597 32742597 PRJNA897077_P_NODE_19220_length_243_cov_1.482353_g19093_i0 PRJNA897077 19220 243 1.482353 3.60211779 Trametes sanguinea 158606 Fungi Fungi 48.9 2.58e-4   NR KAI9069929.1 158606 g19093 i0 65.5 0.358024691358025 29 10 35.8 0 240 154 46 74 KAI9069929.1 hypothetical protein FKP32DRAFT_1537310, partial [Trametes sanguinea] diamond 87 48.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Trametes Trametes sanguinea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;