contig_metadata
9 rows where analysis = "diamond", bioproject = "PRJNA897077" and tax_phylum = "Bacillota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25099591 | 25099591 | PRJNA897077_P_NODE_15600_length_252_cov_0.871508_g15473_i0 | PRJNA897077 | 15600 | 252 | 0.871508 | 2.19620016 | root | 1 | Root_unresolved | Root_unresolved | 114 | 2.64e-27 | NR | WP_079474020.1 | 1371 | g15473 | i0 | 53.8 | 27.7738095238095 | 78 | 36 | 92.9 | 0 | 239 | 6 | 137 | 214 | WP_079474020.1 glycoside hydrolase family 13 protein [Marinococcus halophilus] | diamond | 6999 | 115 | 0.991304347826087 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Marinococcus | Marinococcus halophilus | ||
| 27876982 | 27876982 | PRJNA897077_P_NODE_3685_length_503_cov_1.732558_g3558_i0 | PRJNA897077 | 3685 | 503 | 1.732558 | 8.71476674 | Epulopiscium sp. SCG-B11WGA-EpuloA1 | 77094 | Bacteria | Bacteria | 93.2 | 3.2200000000000003e-21 | NR | ONI39221.1 | 1710701 | g3558 | i0 | 48 | 0.608349900596421 | 102 | 53 | 60.8 | 0 | 1 | 306 | 2 | 103 | ONI39221.1 hypothetical protein AN396_08935 [Epulopiscium sp. SCG-B11WGA-EpuloA1] | diamond | 306 | 93.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Candidatus Epulonipiscium | Epulopiscium sp. SCG-B11WGA-EpuloA1 | ||
| 28192509 | 28192509 | PRJNA897077_P_NODE_18566_length_245_cov_0.906977_g18439_i0 | PRJNA897077 | 18566 | 245 | 0.906977 | 2.22209365 | Clostridiales bacterium | 1898207 | Bacteria | Bacteria | 51.2 | 3.95e-5 | NR | NLL38597.1 | 1898207 | g18439 | i0 | 96 | 0.306122448979592 | 25 | 1 | 30.6 | 0 | 75 | 1 | 1 | 25 | NLL38597.1 preprotein translocase subunit SecA [Clostridiales bacterium] | diamond | 75 | 51.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiales bacterium | ||||
| 29337112 | 29337112 | PRJNA897077_P_NODE_17689_length_247_cov_0.896552_g17562_i0 | PRJNA897077 | 17689 | 247 | 0.896552 | 2.21448344 | Anoxybacillaceae | 3120669 | Bacteria | Bacteria | 157 | 7.73e-45 | NR | WP_183185417.1 | 230470 | g17562 | i0 | 92.7 | 3.98380566801619 | 82 | 6 | 99.6 | 0 | 2 | 247 | 183 | 264 | WP_183185417.1 3-phosphoserine/phosphohydroxythreonine transaminase [Anoxybacteroides voinovskiense] | diamond | 984 | 158 | 0.993670886075949 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Anoxybacillaceae | Anoxybacteroides | Anoxybacteroides voinovskiense | ||
| 30087244 | 30087244 | PRJNA897077_P_NODE_4272_length_468_cov_1.794937_g4145_i0 | PRJNA897077 | 4272 | 468 | 1.794937 | 8.40030516 | Megasphaera elsdenii | 907 | Bacteria | Bacteria | 45.4 | 0.0382 | NR | WP_278967362.1 | 907 | g4145 | i0 | 30.8 | 0.685897435897436 | 107 | 69 | 66 | 4 | 348 | 40 | 361 | 466 | WP_278967362.1 AMP-binding protein [Megasphaera elsdenii] | diamond | 321 | 45.4 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Megasphaera | Megasphaera elsdenii | ||
| 30813977 | 30813977 | PRJNA897077_P_NODE_11874_length_287_cov_1.799065_g11747_i0 | PRJNA897077 | 11874 | 287 | 1.799065 | 5.16331655 | Bacillota bacterium | 1879010 | Bacteria | Bacteria | 78.6 | 6.69e-15 | NR | MCY0899278.1 | 1879010 | g11747 | i0 | 44.4 | 6.15679442508711 | 81 | 41 | 80.5 | 1 | 249 | 19 | 217 | 297 | MCY0899278.1 fumarylacetoacetate hydrolase family protein [Bacillota bacterium] | diamond | 1767 | 78.6 | 1 | Bacteria | Bacillati | Bacillota | Bacillota bacterium | ||||||
| 31129626 | 31129626 | PRJNA897077_P_NODE_12115_length_285_cov_1.080189_g11988_i0 | PRJNA897077 | 12115 | 285 | 1.080189 | 3.07853865 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 43.9 | 0.00649 | NR | MCQ2465791.1 | 2485925 | g11988 | i0 | 40.4 | 0.547368421052632 | 52 | 31 | 54.7 | 0 | 185 | 30 | 47 | 98 | MCQ2465791.1 arsenate reductase family protein [Oscillospiraceae bacterium] | diamond | 156 | 43.9 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 31730732 | 31730732 | PRJNA897077_P_NODE_17917_length_247_cov_0.896552_g17790_i0 | PRJNA897077 | 17917 | 247 | 0.896552 | 2.21448344 | Bacillota bacterium | 1879010 | Bacteria | Bacteria | 170 | 1.38e-49 | NR | HOJ58304.1 | 1879010 | g17790 | i0 | 100 | 0.983805668016194 | 81 | 0 | 98.4 | 0 | 3 | 245 | 267 | 347 | HOJ58304.1 aldo/keto reductase [Bacillota bacterium] | diamond | 243 | 170 | 1 | Bacteria | Bacillati | Bacillota | Bacillota bacterium | ||||||
| 32899764 | 32899764 | PRJNA897077_P_NODE_4880_length_439_cov_1.273224_g4753_i0 | PRJNA897077 | 4880 | 439 | 1.273224 | 5.58945336 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 46.2 | 0.0169 | NR | MBN2851472.1 | 2044939 | g4753 | i0 | 29.8 | 0.847380410022779 | 124 | 74 | 81.3 | 4 | 45 | 401 | 215 | 330 | MBN2851472.1 DNA polymerase I [Clostridia bacterium] | diamond | 372 | 46.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;