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contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA897077" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 16 ✖

bioproject 1

  • PRJNA897077 · 16 ✖

analysis 1

  • diamond · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
873617 873617 PRJNA897077_P_NODE_15221_length_253_cov_0.866667_g15094_i0 PRJNA897077 15221 253 0.866667 2.19266751 Candidatus Kuenenbacteria bacterium 2699743 Bacteria Bacteria 124 3.19e-31   NR MFH1890774.1 2699743 g15094 i0 73.5 0.984189723320158 83 22 98.4 0 3 251 202 284 MFH1890774.1 ribosome biogenesis GTPase Der [Candidatus Kuenenbacteria bacterium] diamond 249 124 1 Bacteria Bacteria candidate phyla   Candidatus Kueneniibacteriota         Candidatus Kuenenbacteria bacterium
3424388 3424388 PRJNA897077_P_NODE_15743_length_252_cov_0.871508_g15616_i0 PRJNA897077 15743 252 0.871508 2.19620016 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 160 1.16e-45   NR HEY6364415.1 2838779 g15616 i0 96.4 0.988095238095238 83 3 98.8 0 250 2 101 183 HEY6364415.1 hydantoinase/oxoprolinase family protein [Candidatus Binatia bacterium] diamond 249 160 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
3424413 3424413 PRJNA897077_P_NODE_17243_length_248_cov_0.891429_g17116_i0 PRJNA897077 17243 248 0.891429 2.21074392 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 152 2.94e-42   NR HJQ83281.1 2838779 g17116 i0 92.7 0.991935483870968 82 6 99.2 0 247 2 295 376 HJQ83281.1 adenosylmethionine--8-amino-7-oxononanoate transaminase [Candidatus Binatia bacterium] diamond 246 152 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
12352553 12352553 PRJNA897077_P_NODE_17530_length_248_cov_0.891429_g17403_i0 PRJNA897077 17530 248 0.891429 2.21074392 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 126 1.64e-31   NR HSF59085.1 2838779 g17403 i0 86.4 1.95967741935484 81 11 98 0 4 246 144 224 HSF59085.1 putative monovalent cation/H+ antiporter subunit A [Candidatus Binatia bacterium] diamond 486 126 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
20000162 20000162 PRJNA897077_P_NODE_14896_length_255_cov_1.708791_g14769_i0 PRJNA897077 14896 255 1.708791 4.35741705 Bacteria 2 Bacteria Bacteria 175 7.21e-50   NR MBI2203486.1 2053607 g14769 i0 89.3 7.90588235294118 84 9 98.8 0 2 253 80 163 MBI2203486.1 CocE/NonD family hydrolase [Candidatus Rokuibacteriota bacterium] diamond 2016 175 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
27435201 27435201 PRJNA897077_P_NODE_18703_length_245_cov_0.906977_g18576_i0 PRJNA897077 18703 245 0.906977 2.22209365 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 102 4.789999999999999e-23   NR HEY7141765.1 2072417 g18576 i0 88.1 1.43265306122449 59 7 72.2 0 243 67 522 580 HEY7141765.1 M28 family peptidase [Candidatus Methylomirabilota bacterium] diamond 351 102 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
27845260 27845260 PRJNA897077_P_NODE_18224_length_246_cov_0.901734_g18097_i0 PRJNA897077 18224 246 0.901734 2.21826564 Candidatus Moraniibacteriota bacterium 2045217 Bacteria Bacteria 137 3.37e-36   NR MBD3238847.1 2045217 g18097 i0 79 1.97560975609756 81 17 98.8 0 244 2 297 377 MBD3238847.1 glycine--tRNA ligase [Candidatus Moraniibacteriota bacterium] diamond 486 137 1 Bacteria Bacteria candidate phyla   Candidatus Moraniibacteriota         Candidatus Moraniibacteriota bacterium
28097940 28097940 PRJNA897077_P_NODE_16925_length_249_cov_0.886364_g16798_i0 PRJNA897077 16925 249 0.886364 2.20704636 Candidatus Berkelbacteria bacterium 2053521 Bacteria Bacteria 43.1 0.0289   NR MCX6810978.1 2053521 g16798 i0 36.1 0.867469879518072 72 41 85.5 2 218 6 122 189 MCX6810978.1 UvrD-helicase domain-containing protein [Candidatus Berkelbacteria bacterium] diamond 216 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Berkelbacteria         Candidatus Berkelbacteria bacterium
28161355 28161355 PRJNA897077_P_NODE_19165_length_244_cov_0.883041_g19038_i0 PRJNA897077 19165 244 0.883041 2.15462004 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 107 1.07e-27   NR MBI2593975.1 2053542 g19038 i0 78.8 0.811475409836066 66 14 81.1 0 242 45 83 148 MBI2593975.1 KH domain-containing protein [Candidatus Daviesbacteria bacterium] diamond 198 107 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
28823937 28823937 PRJNA897077_P_NODE_18248_length_246_cov_0.901734_g18121_i0 PRJNA897077 18248 246 0.901734 2.21826564 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 46.2 3.58e-4   NR HRN86952.1 2099670 g18121 i0 53.7 0.5 41 19 50 0 3 125 53 93 HRN86952.1 hypothetical protein [Candidatus Dojkabacteria bacterium] diamond 123 46.2 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
30213538 30213538 PRJNA897077_P_NODE_18972_length_244_cov_0.912281_g18845_i0 PRJNA897077 18972 244 0.912281 2.22596564 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 131 3.21e-36   NR HEX9662780.1 2838779 g18845 i0 97 0.811475409836066 66 2 81.1 0 45 242 1 66 HEX9662780.1 ferritin-like domain-containing protein [Candidatus Binatia bacterium] diamond 198 131 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30498102 30498102 PRJNA897077_P_NODE_18313_length_246_cov_0.901734_g18186_i0 PRJNA897077 18313 246 0.901734 2.21826564 Patescibacteria group bacterium 2052139 Bacteria Bacteria 150 6.24e-40   NR MEK7533065.1 2052139 g18186 i0 88.8 0.975609756097561 80 9 97.6 0 2 241 596 675 MEK7533065.1 transglycosylase domain-containing protein [Patescibacteria group bacterium] diamond 240 150 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31066980 31066980 PRJNA897077_P_NODE_18095_length_246_cov_0.901734_g17968_i0 PRJNA897077 18095 246 0.901734 2.21826564 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 164 3e-48   NR HEY7559357.1 2838779 g17968 i0 92.6 0.98780487804878 81 6 98.8 0 2 244 52 132 HEY7559357.1 polysaccharide deacetylase family protein [Candidatus Binatia bacterium] diamond 243 164 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31635885 31635885 PRJNA897077_P_NODE_15676_length_252_cov_0.871508_g15549_i0 PRJNA897077 15676 252 0.871508 2.19620016 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 107 4.57e-25   NR HEY2389091.1 2838779 g15549 i0 66.7 2 84 26 100 1 1 252 353 434 HEY2389091.1 sigma-54 dependent transcriptional regulator [Candidatus Binatia bacterium] diamond 504 107 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31730730 31730730 PRJNA897077_P_NODE_16597_length_250_cov_0.881356_g16470_i0 PRJNA897077 16597 250 0.881356 2.20339 Patescibacteria group bacterium 2052139 Bacteria Bacteria 134 1.39e-34   NR MEK7650636.1 2052139 g16470 i0 77.1 0.996 83 19 99.6 0 250 2 403 485 MEK7650636.1 NAD-dependent DNA ligase LigA [Patescibacteria group bacterium] diamond 249 134 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32490387 32490387 PRJNA897077_P_NODE_17339_length_248_cov_0.891429_g17212_i0 PRJNA897077 17339 248 0.891429 2.21074392 Candidatus Anderseniibacteriota bacterium 2053502 Bacteria Bacteria 76.6 4.54e-14   NR MEX2055195.1 2053502 g17212 i0 65.5 1.43951612903226 55 19 66.5 0 196 32 208 262 MEX2055195.1 hypothetical protein [Candidatus Andersenbacteria bacterium] diamond 357 76.6 1 Bacteria Bacteria candidate phyla   Candidatus Anderseniibacteriota         Candidatus Anderseniibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;