RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA896758" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Viruses · 12 ✖

bioproject 1

  • PRJNA896758 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27719570 27719570 PRJNA896758_P_NODE_5144_length_501_cov_1.724299_g4756_i0 PRJNA896758 5144 501 1.724299 8.63873799 Sea turtle neural virus 1 3112944 Viruses Viruses 49.7 0.00171   NR WET19891.1 3112944 g4756 i0 52.4 0.251497005988024 42 20 25.1 0 501 376 456 497 WET19891.1 MAG: nucleoprotein [Sea turtle neural virus 1] diamond 126 49.7 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Sea turtle neural virus 1
27782372 27782372 PRJNA896758_P_NODE_12884_length_320_cov_1.611336_g12494_i0 PRJNA896758 12884 320 1.611336 5.1562752 Caudoviricetes sp. 2832643 Viruses Viruses 109 3.27e-26   NR XOS40026.1 2832643 g12494 i0 64.5 0.7125 76 27 71.3 0 230 3 34 109 XOS40026.1 MAG: hypothetical protein MSP1048_67 [Caudoviricetes sp.] diamond 228 109 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
27782390 27782390 PRJNA896758_P_NODE_24624_length_245_cov_0.895349_g24234_i0 PRJNA896758 24624 245 0.895349 2.19360505 Ralstonia phage PY 3145150 Viruses Viruses 145 2.86e-39   NR XAO34295.1 3145150 g24234 i0 80.2 0.991836734693878 81 16 99.2 0 1 243 177 257 XAO34295.1 hypothetical protein HMHLAPFJ_00001 [Ralstonia phage PY059YO380] diamond 243 145 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Ralstonia phage PY059YO380
28129653 28129653 PRJNA896758_P_NODE_14305_length_304_cov_1.000000_g13915_i0 PRJNA896758 14305 304 1 3.04 Caudoviricetes sp. 2832643 Viruses Viruses 128 1.11e-33   NR XOS40026.1 2832643 g13915 i0 59.4 0.996710526315789 101 41 99.7 0 2 304 213 313 XOS40026.1 MAG: hypothetical protein MSP1048_67 [Caudoviricetes sp.] diamond 303 128 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28413839 28413839 PRJNA896758_P_NODE_9466_length_371_cov_1.429530_g9076_i0 PRJNA896758 9466 371 1.42953 5.3035563 Caudoviricetes sp. 2832643 Viruses Viruses 82.4 5.64e-17   NR XOR88454.1 2832643 g9076 i0 82.2 0.363881401617251 45 8 36.4 0 237 371 1 45 XOR88454.1 MAG: hypothetical protein MSP1660_66 [Caudoviricetes sp.] diamond 135 82.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28823905 28823905 PRJNA896758_P_NODE_19088_length_266_cov_1.533679_g18698_i0 PRJNA896758 19088 266 1.533679 4.07958614 Caudoviricetes sp. 2832643 Viruses Viruses 73.2 9.81e-13   NR XOR52210.1 2832643 g18698 i0 50 1.92857142857143 86 43 97 0 2 259 1074 1159 XOR52210.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 513 73.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29866142 29866142 PRJNA896758_P_NODE_13811_length_309_cov_3.546610_g13421_i0 PRJNA896758 13811 309 3.54661 10.9590249 Micromonas commoda virus 3057169 Viruses Viruses 60.1 6.62e-9   NR XHR79475.1 3057169 g13421 i0 50 1.2621359223301 70 31 68 1 23 232 62 127 XHR79475.1 hypothetical protein [Micromonas commoda virus] diamond 390 60.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae   Micromonas commoda virus
29992568 29992568 PRJNA896758_P_NODE_23011_length_248_cov_0.880000_g22621_i0 PRJNA896758 23011 248 0.88 2.1824 Caudoviricetes sp. 2832643 Viruses Viruses 100 1.05e-22   NR XOS39995.1 2832643 g22621 i0 72.6 0.883064516129032 73 17 88.3 2 30 248 126 195 XOS39995.1 MAG: conserved phage protein [Caudoviricetes sp.] diamond 219 100 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
31414546 31414546 PRJNA896758_P_NODE_21456_length_251_cov_0.865169_g21066_i0 PRJNA896758 21456 251 0.865169 2.17157419 Acanthamoeba castellanii medusavirus 2080449 Viruses Viruses 57.8 2.07e-7   NR YP_010804886.1 2080449 g21066 i0 47.4 0.932270916334661 78 39 93.2 2 4 237 76 151 YP_010804886.1 replication factor C large subunit [Acanthamoeba castellanii medusavirus] diamond 234 57.8 1 Viruses               Acanthamoeba castellanii medusavirus
31477957 31477957 PRJNA896758_P_NODE_25016_length_244_cov_0.900585_g24626_i0 PRJNA896758 25016 244 0.900585 2.1974274 Caudoviricetes sp. 2832643 Viruses Viruses 154 7.47e-42   NR XOR78535.1 2832643 g24626 i0 93.8 0.995901639344262 81 5 99.6 0 1 243 38 118 XOR78535.1 MAG: ATP-dependent DNA helicase uvsW [Caudoviricetes sp.] diamond 243 154 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
31509580 31509580 PRJNA896758_P_NODE_24116_length_246_cov_0.890173_g23726_i0 PRJNA896758 24116 246 0.890173 2.18982558 Durnavirales sp. 2809355 Viruses Viruses 49.3 1.9e-4   NR WRQ64726.1 2809355 g23726 i0 41 1.01219512195122 83 46 98.8 3 246 4 10 91 WRQ64726.1 RNA-dependent RNA polymerase, partial [Durnavirales sp.] diamond 249 49.3 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales     Durnavirales sp.
31801601 31801601 PRJNA896758_P_NODE_10257_length_357_cov_1.084507_g9867_i0 PRJNA896758 10257 357 1.084507 3.87168999 root 1 Root_unresolved Root_unresolved 106 1.95e-26   NR YP_184795.1 39640 g9867 i0 57 9.57983193277311 86 37 72.3 0 345 88 68 153 YP_184795.1 Histone [Bracoviriform congregatae] diamond 3420 107 0.990654205607477 Viruses           Polydnaviriformidae Bracoviriform Bracoviriform congregatae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;