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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA896758" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 24 ✖

tax_clade 1

bioproject 1

  • PRJNA896758 · 24 ✖

analysis 1

  • diamond · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3795837 3795837 PRJNA896758_P_NODE_19263_length_265_cov_1.348958_g18873_i0 PRJNA896758 19263 265 1.348958 3.5747387 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 112 1.11e-27   NR OQR95961.1 74557 g18873 i0 60 0.962264150943396 85 34 96.2 0 11 265 195 279 OQR95961.1 hypothetical protein THRCLA_22037 [Thraustotheca clavata] diamond 255 112 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
11076291 11076291 PRJNA896758_P_NODE_11449_length_339_cov_3.184211_g11059_i0 PRJNA896758 11449 339 3.184211 10.79447529 Nothophytophthora sp. Chile5 2483409 SAR_Eukaryotes SAR_Eukaryotes 141 5.07e-41   NR RLN20103.1 2483409 g11059 i0 88.8 7.7787610619469 80 9 70.8 0 337 98 25 104 RLN20103.1 hypothetical protein BBJ28_00024748 [Nothophytophthora sp. Chile5] diamond 2637 141 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Nothophytophthora Nothophytophthora sp. Chile5
20370241 20370241 PRJNA896758_P_NODE_11076_length_345_cov_1.132353_g10686_i0 PRJNA896758 11076 345 1.132353 3.90661785 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 108 1.11e-26   NR KAG1708806.1 4784 g10686 i0 58.2 13.1913043478261 98 37 81.7 1 283 2 48 145 KAG1708806.1 hypothetical protein DVH05_022428 [Phytophthora capsici] diamond 4551 108 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
26778690 26778690 PRJNA896758_P_NODE_22321_length_249_cov_0.875000_g21931_i0 PRJNA896758 22321 249 0.875 2.17875 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 98.6 9.05e-22   NR OQR89707.1 74557 g21931 i0 61.4 7 83 32 100 0 249 1 166 248 OQR89707.1 60S acidic ribosomal protein P0, partial [Thraustotheca clavata] diamond 1743 98.6 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
26999946 26999946 PRJNA896758_P_NODE_22342_length_249_cov_0.875000_g21952_i0 PRJNA896758 22342 249 0.875 2.17875 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 123 2.91e-33   NR KAF4143879.1 4787 g21952 i0 76.1 131.686746987952 71 17 85.5 0 1 213 100 170 KAF4143879.1 Ubiquitin-conjugating enzyme, partial [Phytophthora infestans] diamond 32790 123 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
27118665 27118665 PRJNA896758_P_NODE_16782_length_282_cov_1.263158_g16392_i0 PRJNA896758 16782 282 1.263158 3.56210556 Bremia lactucae 4779 SAR_Eukaryotes SAR_Eukaryotes 86.7 2.26e-17   NR XP_067820777.1 4779 g16392 i0 45.2 5.72340425531915 93 51 98.9 0 1 279 288 380 XP_067820777.1 hypothetical protein CCR75_006601 [Bremia lactucae] diamond 1614 86.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
27213534 27213534 PRJNA896758_P_NODE_20142_length_258_cov_2.037838_g19752_i0 PRJNA896758 20142 258 2.037838 5.25762204 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 49.3 2.18e-4   NR OQR96439.1 74557 g19752 i0 56.3 1.11627906976744 48 21 55.8 0 258 115 344 391 OQR96439.1 60S ribosomal protein L24, partial [Thraustotheca clavata] diamond 288 49.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
27221176 27221176 PRJNA896758_P_NODE_24562_length_245_cov_0.895349_g24172_i0 PRJNA896758 24562 245 0.895349 2.19360505 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 104 3.94e-24   NR TMW66833.1 41045 g24172 i0 65.3 8.16734693877551 75 26 91.8 0 3 227 367 441 TMW66833.1 hypothetical protein Poli38472_011949 [Pythium oligandrum] diamond 2001 105 0.990476190476191 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
27379712 27379712 PRJNA896758_P_NODE_1783_length_864_cov_1.230088_g1450_i0 PRJNA896758 1783 864 1.230088 10.62796032 Saprolegnia 4769 SAR_Eukaryotes SAR_Eukaryotes 207 1.0399999999999999e-60   NR XP_012209436.1 695850 g1450 i0 45.1 1.89583333333333 273 91 91 8 3 788 80 304 XP_012209436.1 hypothetical protein SPRG_14910 [Saprolegnia parasitica CBS 223.65] diamond 1638 209 0.990430622009569 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
27537411 27537411 PRJNA896758_P_NODE_23683_length_247_cov_0.885057_g23293_i0 PRJNA896758 23683 247 0.885057 2.18609079 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 88.2 4.81e-20   NR CAI5728785.1 162125 g23293 i0 63.4 3.69230769230769 82 29 98.4 1 245 3 3 84 CAI5728785.1 unnamed protein product [Hyaloperonospora brassicae] diamond 912 88.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora brassicae
27687909 27687909 PRJNA896758_P_NODE_22564_length_249_cov_0.875000_g22174_i0 PRJNA896758 22564 249 0.875 2.17875 Saprolegnia diclina VS2 112098 SAR_Eukaryotes SAR_Eukaryotes 64.3 9.64e-10   NR XP_008615106.1 1156394 g22174 i0 50.8 1.42168674698795 59 29 71.1 0 3 179 213 271 XP_008615106.1 hypothetical protein SDRG_10870 [Saprolegnia diclina VS20] diamond 354 64.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
28003480 28003480 PRJNA896758_P_NODE_21805_length_250_cov_0.870056_g21415_i0 PRJNA896758 21805 250 0.870056 2.17514 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 63.2 2.6e-9   NR DBA04060.1 4803 g21415 i0 53.7 3.876 54 24 64.8 1 244 83 553 605 DBA04060.1 TPA: hypothetical protein N0F65_009407 [Lagenidium giganteum] diamond 969 63.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
28042596 28042596 PRJNA896758_P_NODE_20885_length_252_cov_2.178771_g20495_i0 PRJNA896758 20885 252 2.178771 5.49050292 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 50.4 8.17e-5   NR XP_067814794.1 4779 g20495 i0 32.1 1.86904761904762 84 55 97.6 1 7 252 185 268 XP_067814794.1 hypothetical protein CCR75_001807 [Bremia lactucae] diamond 471 50.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
28547954 28547954 PRJNA896758_P_NODE_14947_length_296_cov_1.004484_g14557_i0 PRJNA896758 14947 296 1.004484 2.97327264 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 104 1.03e-26   NR XP_067789141.1 4785 g14557 i0 73.4 4.42905405405405 64 17 64.9 0 295 104 31 94 XP_067789141.1 40S ribosomal protein S10 [Phytophthora cinnamomi] diamond 1311 105 0.990476190476191 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
29487032 29487032 PRJNA896758_P_NODE_18610_length_270_cov_0.964467_g18220_i0 PRJNA896758 18610 270 0.964467 2.6040609 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 47.8 9.45e-4   NR OQR89904.1 74557 g18220 i0 41.2 1.45555555555556 68 37 72.2 2 22 216 605 672 OQR89904.1 transmembrane protein, partial [Thraustotheca clavata] diamond 393 47.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
29779071 29779071 PRJNA896758_P_NODE_15851_length_288_cov_1.432558_g15461_i0 PRJNA896758 15851 288 1.432558 4.12576704 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 120 3.5200000000000003e-29   NR KAF1783236.1 29920 g15461 i0 70.5 6.42708333333333 88 22 91.7 1 285 22 541 624 KAF1783236.1 Heat shock protein Hsp90, N-terminal [Phytophthora cactorum] diamond 1851 120 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
29937106 29937106 PRJNA896758_P_NODE_22691_length_248_cov_1.674286_g22301_i0 PRJNA896758 22691 248 1.674286 4.15222928 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 90.1 9.37e-20   NR RLN46345.1 325452 g22301 i0 57.1 7.05241935483871 84 34 99.2 2 246 1 104 187 RLN46345.1 hypothetical protein BBJ29_006599 [Phytophthora kernoviae] diamond 1749 90.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora kernoviae
30000356 30000356 PRJNA896758_P_NODE_23231_length_247_cov_1.672414_g22841_i0 PRJNA896758 23231 247 1.672414 4.13086258 Pythiaceae 4782 SAR_Eukaryotes SAR_Eukaryotes 94.7 2.74e-23   NR DAZ97608.1 4803 g22841 i0 56.3 1.95546558704453 80 28 94.7 3 11 244 4 78 DAZ97608.1 TPA: hypothetical protein N0F65_002227 [Lagenidium giganteum] diamond 483 94.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
30213528 30213528 PRJNA896758_P_NODE_7192_length_422_cov_1.415473_g6802_i0 PRJNA896758 7192 422 1.415473 5.97329606 Phytophthora boehmeriae 109152 SAR_Eukaryotes SAR_Eukaryotes 117 8.07e-28   NR KAG7399314.1 109152 g6802 i0 43.7 0.895734597156398 126 70 88.9 1 1 375 301 426 KAG7399314.1 hypothetical protein PHYBOEH_009116 [Phytophthora boehmeriae] diamond 378 117 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora boehmeriae
30529536 30529536 PRJNA896758_P_NODE_19553_length_263_cov_1.284211_g19163_i0 PRJNA896758 19553 263 1.284211 3.37747493 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 101 1.2500000000000001e-22   NR TYZ51215.1 1485010 g19163 i0 54.7 1.96197718631179 86 38 98.1 1 2 259 789 873 TYZ51215.1 hypothetical protein PybrP1_012702 [[Pythium] brassicae (nom. inval.)] diamond 516 101 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
31549021 31549021 PRJNA896758_P_NODE_25076_length_244_cov_0.900585_g24686_i0 PRJNA896758 25076 244 0.900585 2.1974274 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 47 0.00117   NR GLD98269.1 114742 g24686 i0 37.2 5.97540983606557 78 48 95.9 1 9 242 390 466 GLD98269.1 hypothetical protein PINS_up006966 [Pythium insidiosum] diamond 1458 47.4 0.991561181434599 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
32181568 32181568 PRJNA896758_P_NODE_22358_length_249_cov_0.875000_g21968_i0 PRJNA896758 22358 249 0.875 2.17875 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 119 4.6699999999999995e-30   NR RAW26519.1 29920 g21968 i0 67.5 8 83 22 100 1 249 1 186 263 RAW26519.1 60S ribosomal protein [Phytophthora cactorum] diamond 1992 120 0.991666666666667 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
32363807 32363807 PRJNA896758_P_NODE_13519_length_313_cov_1.141667_g13129_i0 PRJNA896758 13519 313 1.141667 3.57341771 Phytophthora fragariaefolia 1490495 SAR_Eukaryotes SAR_Eukaryotes 74.7 5.24e-13   NR GMF18554.1 1490495 g13129 i0 38.8 0.987220447284345 103 60 97.8 3 307 2 848 948 GMF18554.1 unnamed protein product [Phytophthora fragariaefolia] diamond 309 74.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariaefolia
32371479 32371479 PRJNA896758_P_NODE_2379_length_746_cov_1.442793_g2022_i0 PRJNA896758 2379 746 1.442793 10.76323578 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 56.2 5.37e-5   NR ETL83427.1 4792 g2022 i0 38.8 1.61662198391421 67 37 26.1 3 744 550 591 655 ETL83427.1 hypothetical protein L917_16625 [Phytophthora nicotianae] diamond 1206 56.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;