RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA896758" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA896758 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27024021 27024021 PRJNA896758_P_NODE_24442_length_245_cov_0.895349_g24052_i0 PRJNA896758 24442 245 0.895349 2.19360505 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 83.6 1.51e-17   NR MES1908571.1 1215613 g24052 i0 55.1 2.63265306122449 78 35 95.5 0 243 10 143 220 MES1908571.1 hypothetical protein [Cercozoa sp. M6MM] diamond 645 83.6 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
29455295 29455295 PRJNA896758_P_NODE_5990_length_464_cov_1.785166_g5601_i0 PRJNA896758 5990 464 1.785166 8.28317024 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 178 2.05e-50   NR MES1910324.1 1215613 g5601 i0 51.9 1.04741379310345 162 70 99.6 1 2 463 131 292 MES1910324.1 hypothetical protein [Cercozoa sp. M6MM] diamond 486 178 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
30845626 30845626 PRJNA896758_P_NODE_18654_length_269_cov_1.571429_g18264_i0 PRJNA896758 18654 269 1.571429 4.22714401 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 74.3 4.33e-15   NR MES1913934.1 1215613 g18264 i0 74.5 0.524163568773234 47 12 52.4 0 3 143 40 86 MES1913934.1 hypothetical protein [Cercozoa sp. M6MM] diamond 141 74.3 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;