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contig_metadata

15 rows where analysis = "diamond", bioproject = "PRJNA896758" and tax_phylum = "Bdellovibrionota"

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tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 15 ✖

tax_kingdom 1

bioproject 1

  • PRJNA896758 · 15 ✖

analysis 1

  • diamond · 15 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3423682 3423682 PRJNA896758_P_NODE_6343_length_452_cov_1.216359_g5953_i0 PRJNA896758 6343 452 1.216359 5.49794268 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 160 4.2099999999999996e-47   NR MCB0370127.1 2053517 g5953 i0 72.3 0.743362831858407 112 31 74.3 0 336 1 37 148 MCB0370127.1 40S ribosomal protein S14 [Bdellovibrionales bacterium] diamond 336 160 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
26992233 26992233 PRJNA896758_P_NODE_22822_length_248_cov_0.880000_g22432_i0 PRJNA896758 22822 248 0.88 2.1824 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 75.9 8.67e-14   NR HAR41289.1 2053517 g22432 i0 62.5 3.81048387096774 64 21 77.4 1 2 193 221 281 HAR41289.1 hypothetical protein [Bdellovibrionales bacterium] diamond 945 75.9 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27308755 27308755 PRJNA896758_P_NODE_18883_length_268_cov_1.184615_g18493_i0 PRJNA896758 18883 268 1.184615 3.1747682 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 63.2 2.34e-9   NR MCB0369784.1 2053517 g18493 i0 58.5 0.593283582089552 53 22 59.3 0 192 34 160 212 MCB0369784.1 insulinase family protein [Bdellovibrionales bacterium] diamond 159 63.2 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28603270 28603270 PRJNA896758_P_NODE_21807_length_250_cov_0.870056_g21417_i0 PRJNA896758 21807 250 0.870056 2.17514 Micavibrio sp. 2024841 Bacteria Bacteria 148 2.9e-39   NR HEU4839420.1 2024841 g21417 i0 89.2 0.996 83 9 99.6 0 1 249 71 153 HEU4839420.1 type I secretion system permease/ATPase [Micavibrio sp.] diamond 249 148 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
28760906 28760906 PRJNA896758_P_NODE_11047_length_345_cov_1.981618_g10657_i0 PRJNA896758 11047 345 1.981618 6.8365821 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 47.4 0.0019   NR MCB0368971.1 2053517 g10657 i0 35.8 0.460869565217391 53 34 46.1 0 88 246 34 86 MCB0368971.1 hypothetical protein [Bdellovibrionales bacterium] diamond 159 47.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29013967 29013967 PRJNA896758_P_NODE_26608_length_241_cov_0.916667_g26218_i0 PRJNA896758 26608 241 0.916667 2.20916747 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 44.3 0.00254   NR MCB0368049.1 2053517 g26218 i0 65.6 0.398340248962656 32 11 39.8 0 86 181 62 93 MCB0368049.1 hypothetical protein [Bdellovibrionales bacterium] diamond 96 44.3 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29360990 29360990 PRJNA896758_P_NODE_22669_length_248_cov_1.760000_g22279_i0 PRJNA896758 22669 248 1.76 4.3648 Silvanigrellaceae bacterium 2654442 Bacteria Bacteria 103 2.55e-25   NR MBX9702836.1 2654442 g22279 i0 53.1 0.979838709677419 81 38 98 0 248 6 126 206 MBX9702836.1 protein kinase [Silvanigrellaceae bacterium] diamond 243 103 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Silvanigrellales Silvanigrellaceae   Silvanigrellaceae bacterium
29992547 29992547 PRJNA896758_P_NODE_11491_length_339_cov_1.157895_g11101_i0 PRJNA896758 11491 339 1.157895 3.92526405 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 141 5.88e-41   NR MCB0370182.1 2053517 g11101 i0 87 1.43362831858407 77 10 68.1 0 1 231 43 119 MCB0370182.1 hypothetical protein [Bdellovibrionales bacterium] diamond 486 141 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30118751 30118751 PRJNA896758_P_NODE_16312_length_285_cov_1.382075_g15922_i0 PRJNA896758 16312 285 1.382075 3.93891375 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 45.1 0.00272   NR MCB0370850.1 2053517 g15922 i0 52.8 0.378947368421053 36 16 36.8 1 204 100 52 87 MCB0370850.1 hypothetical protein [Bdellovibrionales bacterium] diamond 108 45.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31351360 31351360 PRJNA896758_P_NODE_11596_length_338_cov_0.871698_g11206_i0 PRJNA896758 11596 338 0.871698 2.94633924 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 100 5.54e-25   NR MCB0371230.1 2053517 g11206 i0 72.5 0.612426035502959 69 19 61.2 0 6 212 18 86 MCB0371230.1 hypothetical protein [Bdellovibrionales bacterium] diamond 207 100 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31920635 31920635 PRJNA896758_P_NODE_26097_length_242_cov_0.911243_g25707_i0 PRJNA896758 26097 242 0.911243 2.20520806 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 45.4 0.00404   NR MCB0370360.1 2053517 g25707 i0 33.8 1.90909090909091 77 51 95.5 0 11 241 158 234 MCB0370360.1 HAD-IC family P-type ATPase [Bdellovibrionales bacterium] diamond 462 45.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32015517 32015517 PRJNA896758_P_NODE_14218_length_305_cov_0.995690_g13828_i0 PRJNA896758 14218 305 0.99569 3.0368545 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 130 4.71e-33   NR MCB0370360.1 2053517 g13828 i0 81.8 0.757377049180328 77 14 75.7 0 303 73 400 476 MCB0370360.1 HAD-IC family P-type ATPase [Bdellovibrionales bacterium] diamond 231 130 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32110508 32110508 PRJNA896758_P_NODE_26858_length_230_cov_2.738854_g26468_i0 PRJNA896758 26858 230 2.738854 6.2993642 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 104 2.67e-27   NR MCB0369232.1 2053517 g26468 i0 62.3 0.9 69 26 90 0 228 22 10 78 MCB0369232.1 hypothetical protein [Bdellovibrionales bacterium] diamond 207 104 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32142144 32142144 PRJNA896758_P_NODE_15618_length_289_cov_1.685185_g15228_i0 PRJNA896758 15618 289 1.685185 4.87018465 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 66.6 3.47e-11   NR MCB0368770.1 2053517 g15228 i0 39.5 0.892733564013841 86 49 86.2 2 39 287 4 89 MCB0368770.1 hypothetical protein [Bdellovibrionales bacterium] diamond 258 66.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32363834 32363834 PRJNA896758_P_NODE_6719_length_437_cov_2.541209_g6329_i0 PRJNA896758 6719 437 2.541209 11.10508333 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 241 1.8200000000000003e-79   NR MCB0369869.1 2053517 g6329 i0 82.8 1.9908466819222 145 25 99.5 0 1 435 3 147 MCB0369869.1 uL15 family ribosomal protein [Bdellovibrionales bacterium] diamond 870 241 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;