RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA896758" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA896758 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27031706 27031706 PRJNA896758_P_NODE_10622_length_351_cov_2.064748_g10232_i0 PRJNA896758 10622 351 2.064748 7.24726548 Halobacteriales 2235 Archaea Archaea 96.7 7.980000000000001e-21   NR PSQ48893.1 1919203 g10232 i0 49 11.8632478632479 96 49 82.1 0 349 62 309 404 PSQ48893.1 MAG: hypothetical protein BRD19_05075 [Halobacteriales archaeon SW_7_65_23] diamond 4164 97.4 0.992813141683778 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon SW_7_65_23
30403685 30403685 PRJNA896758_P_NODE_21953_length_250_cov_0.870056_g21563_i0 PRJNA896758 21953 250 0.870056 2.17514 Methanobacteriota archaeon 2026739 Archaea Archaea 59.3 6.16e-8   NR MBU38768.1 2026739 g21563 i0 38 1.2 100 43 98.4 4 1 246 1727 1825 MBU38768.1 hypothetical protein [Methanobacteriota archaeon] diamond 300 59.3 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;