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contig_metadata

10 rows where analysis = "diamond", bioproject = "PRJNA896758" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 10 ✖

bioproject 1

  • PRJNA896758 · 10 ✖

analysis 1

  • diamond · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26960603 26960603 PRJNA896758_P_NODE_24402_length_245_cov_0.895349_g24012_i0 PRJNA896758 24402 245 0.895349 2.19360505 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 131 1.51e-35   NR HSH17903.1 2973664 g24012 i0 79 0.991836734693878 81 17 99.2 0 244 2 86 166 HSH17903.1 DNA repair protein RadC [Candidatus Saccharimonadales bacterium] diamond 243 131 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
27719548 27719548 PRJNA896758_P_NODE_12624_length_324_cov_0.920319_g12234_i0 PRJNA896758 12624 324 0.920319 2.98183356 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 148 3.72e-39   NR RMD63071.1 2762014 g12234 i0 63.6 0.990740740740741 107 38 99.1 1 3 323 332 437 RMD63071.1 MAG: hypothetical protein D6833_06050, partial [Candidatus Parcubacteria bacterium] diamond 321 148 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
28034966 28034966 PRJNA896758_P_NODE_14245_length_304_cov_3.904762_g13855_i0 PRJNA896758 14245 304 3.904762 11.87047648 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 82 2.78e-16   NR MCA9369857.1 2026804 g13855 i0 51.4 5.28947368421053 74 36 73 0 6 227 3 76 MCA9369857.1 DnaJ domain-containing protein [Candidatus Woesebacteria bacterium] diamond 1608 82 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
28792423 28792423 PRJNA896758_P_NODE_12427_length_326_cov_1.810277_g12037_i0 PRJNA896758 12427 326 1.810277 5.90150302 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 204 1.92e-65   NR MCA9368649.1 2030810 g12037 i0 87 0.993865030674847 108 14 99.4 0 324 1 23 130 MCA9368649.1 hypothetical protein [Candidatus Kaiserbacteria bacterium] diamond 324 204 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
28950709 28950709 PRJNA896758_P_NODE_21588_length_250_cov_1.666667_g21198_i0 PRJNA896758 21588 250 1.666667 4.1666675 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 99 2.3000000000000003e-22   NR NLA43612.1 2026720 g21198 i0 57.8 0.996 83 35 99.6 0 249 1 28 110 NLA43612.1 HNH endonuclease [Candidatus Saccharibacteria bacterium] diamond 249 99 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30181992 30181992 PRJNA896758_P_NODE_19172_length_265_cov_3.463542_g18782_i0 PRJNA896758 19172 265 3.463542 9.1783863 Candidatus Aerophobetes bacterium 2030807 Bacteria Bacteria 74.3 5.07e-14   NR RLE11364.1 2030807 g18782 i0 49.4 4.72075471698113 83 40 92.8 2 257 12 60 141 RLE11364.1 MAG: dTMP kinase [Candidatus Aerophobetes bacterium] diamond 1251 74.3 1 Bacteria Bacteria candidate phyla   Candidatus Aerophobota         Candidatus Aerophobota bacterium
30560964 30560964 PRJNA896758_P_NODE_22813_length_248_cov_0.880000_g22423_i0 PRJNA896758 22813 248 0.88 2.1824 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 67.4 3.09e-11   NR MBY0352728.1 2803731 g22423 i0 44.3 0.737903225806452 61 34 73.8 0 12 194 180 240 MBY0352728.1 class I SAM-dependent methyltransferase [Candidatus Babeliales bacterium] diamond 183 67.4 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium
30592717 30592717 PRJNA896758_P_NODE_18893_length_268_cov_1.148718_g18503_i0 PRJNA896758 18893 268 1.148718 3.07856424 Patescibacteria group bacterium 2052139 Bacteria Bacteria 46.2 0.00303   NR MDQ5932045.1 2052139 g18503 i0 60 0.335820895522388 30 12 33.6 0 179 268 1 30 MDQ5932045.1 ATP-binding cassette, subfamily bacterial [Patescibacteria group bacterium] diamond 90 46.2 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31129608 31129608 PRJNA896758_P_NODE_25455_length_243_cov_0.905882_g25065_i0 PRJNA896758 25455 243 0.905882 2.20129326 Patescibacteria group bacterium 2052139 Bacteria Bacteria 85.1 5.42e-18   NR MEK7583421.1 2052139 g25065 i0 60.3 0.777777777777778 63 25 77.8 0 42 230 94 156 MEK7583421.1 alanine--tRNA ligase-related protein [Patescibacteria group bacterium] diamond 189 85.1 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32836781 32836781 PRJNA896758_P_NODE_10040_length_361_cov_0.923611_g9650_i0 PRJNA896758 10040 361 0.923611 3.33423571 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 60.1 1.16e-7   NR PCI89930.1 2030810 g9650 i0 38.7 0.623268698060942 75 44 60.7 2 112 330 197 271 PCI89930.1 MAG: hypothetical protein COB18_02290 [Candidatus Kaiserbacteria bacterium] diamond 225 60.1 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;