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contig_metadata

17 rows where analysis = "diamond", bioproject = "PRJNA896554" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA896554 · 17 ✖

analysis 1

  • diamond · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3422929 3422929 PRJNA896554_P_NODE_72843_length_438_cov_1.054795_g65303_i0 PRJNA896554 72843 438 1.054795 4.6200021 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 270 6.449999999999999e-90   NR AXS78234.1 6269 g65303 i0 89.7 113 146 15 100 0 1 438 19 164 AXS78234.1 ras-related protein rab-1a [Anisakis simplex] diamond 49494 272 0.992647058823529 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
12351665 12351665 PRJNA896554_P_NODE_97470_length_338_cov_2.898113_g89930_i0 PRJNA896554 97470 338 2.898113 9.79562194 Meloidogyne graminicola 189291 Nematoda Nematoda 96.3 6.92e-21   NR KAF7633204.1 189291 g89930 i0 66.3 0.710059171597633 80 24 71 3 97 336 21 97 KAF7633204.1 Aconitate hydratase, mitochondrial [Meloidogyne graminicola] diamond 240 96.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
15271725 15271725 PRJNA896554_P_NODE_35312_length_1033_cov_6.054167_g28824_i0 PRJNA896554 35312 1033 6.054167 62.53954511 Bursaphelenchus okinawaensis 465554 Nematoda Nematoda 148 1.23e-38   NR CAD5214079.1 465554 g28824 i0 40.3 1.40851887705712 248 137 70.3 6 1029 304 7 249 CAD5214079.1 unnamed protein product [Bursaphelenchus okinawaensis] diamond 1455 148 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus okinawaensis
25470487 25470487 PRJNA896554_P_NODE_160460_length_247_cov_0.885057_g152920_i0 PRJNA896554 160460 247 0.885057 2.18609079 Anisakis simplex 6269 Nematoda Nematoda 121 1.73e-32   NR VDK59751.1 6269 g152920 i0 79.7 1.88259109311741 74 15 89.9 0 25 246 1 74 VDK59751.1 unnamed protein product [Anisakis simplex] diamond 465 121 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
26992193 26992193 PRJNA896554_P_NODE_30522_length_1220_cov_2.327812_g24671_i0 PRJNA896554 30522 1220 2.327812 28.3993064 Ditylenchus destructor 166010 Nematoda Nematoda 71.2 3.82e-10   NR KAI1714886.1 166010 g24671 i0 27.4 0.909836065573771 186 118 44.8 5 64 609 48 220 KAI1714886.1 glycosyl hydrolases family 25 domain-containing protein [Ditylenchus destructor] diamond 1110 71.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
27213503 27213503 PRJNA896554_P_NODE_55082_length_596_cov_1.535373_g47605_i0 PRJNA896554 55082 596 1.535373 9.15082308 Aphelenchoides avenae 70226 Nematoda Nematoda 121 1.88e-30   NR KAH7727115.1 70226 g47605 i0 57.6 0.463087248322148 92 39 46.3 0 279 4 123 214 KAH7727115.1 glutaredoxin 2 [Aphelenchoides avenae] diamond 276 121 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
27466611 27466611 PRJNA896554_P_NODE_164403_length_245_cov_0.895349_g156863_i0 PRJNA896554 164403 245 0.895349 2.19360505 Aphelenchoides besseyi 269767 Nematoda Nematoda 105 4.74e-26   NR KAI6205443.1 269767 g156863 i0 65.8 0.96734693877551 79 26 96.7 1 8 244 6 83 KAI6205443.1 Maleylacetoacetate isomerase [Aphelenchoides besseyi] diamond 237 105 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides besseyi
27560971 27560971 PRJNA896554_P_NODE_113344_length_303_cov_1.052174_g105804_i0 PRJNA896554 113344 303 1.052174 3.18808722 Nippostrongylus brasiliensis 27835 Nematoda Nematoda 52 4.33e-5   NR VDL71397.1 27835 g105804 i0 51.2 1.1584158415841601 41 19 39.6 1 290 171 303 343 VDL71397.1 unnamed protein product, partial [Nippostrongylus brasiliensis] diamond 351 52 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Nippostrongylus Nippostrongylus brasiliensis
27656079 27656079 PRJNA896554_P_NODE_27544_length_1358_cov_5.831907_g22138_i0 PRJNA896554 27544 1358 5.831907 79.19729706 Meloidogyne graminicola 189291 Nematoda Nematoda 61.6 1.82e-6   NR AVZ46778.1 189291 g22138 i0 33.1 0.287187039764359 130 87 28.7 0 433 822 117 246 AVZ46778.1 hypothetical protein [Meloidogyne graminicola] diamond 390 61.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
27782342 27782342 PRJNA896554_P_NODE_119584_length_292_cov_1.054795_g112044_i0 PRJNA896554 119584 292 1.054795 3.0800014 Caenorhabditis elegans 6239 Nematoda Nematoda 61.2 2.04e-8   NR NP_491324.1 6239 g112044 i0 34.9 3.67808219178082 86 53 87.3 3 258 4 117 200 NP_491324.1 C-CAP/cofactor C-like domain-containing protein [Caenorhabditis elegans] diamond 1074 61.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
28674055 28674055 PRJNA896554_P_NODE_141027_length_261_cov_1.952128_g133487_i0 PRJNA896554 141027 261 1.952128 5.09505408 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 161 2.0399999999999998e-47   NR VDN07322.1 103827 g133487 i0 84.9 1.97701149425287 86 13 98.9 0 259 2 78 163 VDN07322.1 unnamed protein product [Thelazia callipaeda] diamond 516 162 0.993827160493827 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Thelaziidae Thelazia Thelazia callipaeda
28800077 28800077 PRJNA896554_P_NODE_162887_length_246_cov_0.890173_g155347_i0 PRJNA896554 162887 246 0.890173 2.18982558 Rhabditida 6236 Nematoda Nematoda 55.5 1.29e-6   NR KHN77764.1 6265 g155347 i0 50 10.5609756097561 48 24 58.5 0 144 1 184 231 KHN77764.1 Polypyrimidine tract-binding protein 1 [Toxocara canis] diamond 2598 55.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
29392589 29392589 PRJNA896554_P_NODE_157469_length_248_cov_0.880000_g149929_i0 PRJNA896554 157469 248 0.88 2.1824 Dirofilaria immitis 6287 Nematoda Nematoda 43.1 0.0212   NR MCP9262700.1 6287 g149929 i0 37.8 0.991935483870968 82 36 91.9 4 21 248 67 139 MCP9262700.1 hypothetical protein [Dirofilaria immitis] diamond 246 43.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Dirofilaria Dirofilaria immitis
29455239 29455239 PRJNA896554_P_NODE_146190_length_255_cov_1.269231_g138650_i0 PRJNA896554 146190 255 1.269231 3.23653905 Necator americanus 51031 Nematoda Nematoda 60.1 3.25e-8   NR ETN81849.1 51031 g138650 i0 41.1 4.14117647058824 90 47 98.8 2 2 253 227 316 ETN81849.1 HEAT repeat protein [Necator americanus] diamond 1056 60.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
29747231 29747231 PRJNA896554_P_NODE_127390_length_280_cov_1.222222_g119850_i0 PRJNA896554 127390 280 1.222222 3.4222216 Nematoda 6231 Nematoda Nematoda 84 7.14e-17   NR KAF7640410.1 189291 g119850 i0 39.1 10.5428571428571 87 52 92.1 1 273 16 201 287 KAF7640410.1 Autophagy-related protein 3 [Meloidogyne graminicola] diamond 2952 84.7 0.991735537190083 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
30568622 30568622 PRJNA896554_P_NODE_65553_length_488_cov_1.963855_g58015_i0 PRJNA896554 65553 488 1.963855 9.5836124 root 1 Root_unresolved Root_unresolved 80.5 1.03e-15   NR CAD2192714.1 390850 g58015 i0 45.3 1.18647540983607 95 52 58.4 0 94 378 22 116 CAD2192714.1 unnamed protein product [Meloidogyne enterolobii] diamond 579 80.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
32015496 32015496 PRJNA896554_P_NODE_30578_length_1217_cov_6.164336_g24716_i0 PRJNA896554 30578 1217 6.164336 75.01996912 Meloidogyne graminicola 189291 Nematoda Nematoda 112 2.9e-24   NR AVZ46778.1 189291 g24716 i0 51.5 0.320460147904684 130 62 31.8 1 351 737 117 246 AVZ46778.1 hypothetical protein [Meloidogyne graminicola] diamond 390 112 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;