RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA896554" and tax_kingdom = "Nanobdellati"

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tax_superkingdom 1

tax_kingdom 1

  • Nanobdellati · 2 ✖

bioproject 1

  • PRJNA896554 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26620194 26620194 PRJNA896554_P_NODE_144061_length_258_cov_0.929730_g136521_i0 PRJNA896554 144061 258 0.92973 2.3987034 Nanobdellati 1783276 Archaea Archaea 139 4.9899999999999995e-37   NR MBU0461306.1 2026764 g136521 i0 74.1 7.90697674418605 85 22 98.8 0 3 257 34 118 MBU0461306.1 class I tRNA ligase family protein [Nanoarchaeota archaeon] diamond 2040 140 0.992857142857143 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32332262 32332262 PRJNA896554_P_NODE_130979_length_275_cov_1.143564_g123439_i0 PRJNA896554 130979 275 1.143564 3.144801 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 78.6 2.31e-16   NR MCS7109488.1 2250274 g123439 i0 57.1 1.59272727272727 49 21 53.5 0 199 53 76 124 MCS7109488.1 hypothetical protein [Candidatus Micrarchaeota archaeon] diamond 438 78.6 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;