contig_metadata
55 rows where analysis = "diamond", bioproject = "PRJNA893346" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 868174 | 868174 | PRJNA893346_P_NODE_24261_length_310_cov_1.000000_g23771_i0 | PRJNA893346 | 24261 | 310 | 1 | 3.1 | Gammaproteobacteria bacterium | 1913989 | Bacteria | Bacteria | 145 | 6.16e-38 | NR | MDH3992018.1 | 1913989 | g23771 | i0 | 70 | 6.75483870967742 | 100 | 28 | 96.8 | 1 | 303 | 4 | 458 | 555 | MDH3992018.1 SDR family oxidoreductase [Gammaproteobacteria bacterium] | diamond | 2094 | 145 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Gammaproteobacteria bacterium | |||||
| 1243261 | 1243261 | PRJNA893346_P_NODE_38261_length_243_cov_0.905882_g37771_i0 | PRJNA893346 | 38261 | 243 | 0.905882 | 2.20129326 | Pelomonas sp. Root1444 | 1736464 | Bacteria | Bacteria | 133 | 8.52e-36 | NR | WP_056876617.1 | 1736464 | g37771 | i0 | 86.3 | 0.987654320987654 | 80 | 11 | 98.8 | 0 | 242 | 3 | 166 | 245 | WP_056876617.1 Hsp33 family molecular chaperone HslO [Pelomonas sp. Root1444] | diamond | 240 | 133 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Pelomonas sp. Root1444 | ||
| 7621315 | 7621315 | PRJNA893346_P_NODE_38746_length_242_cov_2.278107_g38256_i0 | PRJNA893346 | 38746 | 242 | 2.278107 | 5.51301894 | Bradyrhizobium canariense | 255045 | Bacteria | Bacteria | 127 | 6.31e-32 | NR | WP_085350897.1 | 255045 | g38256 | i0 | 82.3 | 8.85123966942149 | 79 | 13 | 97.9 | 1 | 6 | 242 | 91 | 168 | WP_085350897.1 molecular chaperone DnaK [Bradyrhizobium canariense] | diamond | 2142 | 127 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium canariense | ||
| 21269784 | 21269784 | PRJNA893346_P_NODE_15277_length_398_cov_1.329231_g14789_i0 | PRJNA893346 | 15277 | 398 | 1.329231 | 5.29033938 | Escherichia coli | 562 | Bacteria | Bacteria | 211 | 1.33e-67 | NR | WP_140424235.1 | 562 | g14789 | i0 | 82.2 | 6.21859296482412 | 118 | 21 | 88.9 | 0 | 398 | 45 | 52 | 169 | WP_140424235.1 ADP-ribosylation factor-like protein, partial [Escherichia coli] | diamond | 2475 | 211 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 22545268 | 22545268 | PRJNA893346_P_NODE_35998_length_247_cov_0.885057_g35508_i0 | PRJNA893346 | 35998 | 247 | 0.885057 | 2.18609079 | Bacteria | 2 | Bacteria | Bacteria | 131 | 1.19e-35 | NR | RMF12206.1 | 1913988 | g35508 | i0 | 75.3 | 8.87854251012146 | 81 | 19 | 98.4 | 1 | 1 | 243 | 123 | 202 | RMF12206.1 MAG: NADP-dependent isocitrate dehydrogenase, partial [Alphaproteobacteria bacterium] | diamond | 2193 | 131 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Alphaproteobacteria bacterium | |||||
| 26842082 | 26842082 | PRJNA893346_P_NODE_19341_length_351_cov_0.967626_g18852_i0 | PRJNA893346 | 19341 | 351 | 0.967626 | 3.39636726 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 92 | 3.87e-19 | NR | MDI9337411.1 | 1913988 | g18852 | i0 | 42.2 | 14.8547008547009 | 116 | 64 | 99.1 | 1 | 350 | 3 | 68 | 180 | MDI9337411.1 ornithine--oxo-acid transaminase [Alphaproteobacteria bacterium] | diamond | 5214 | 92.8 | 0.991379310344828 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Alphaproteobacteria bacterium | |||||
| 27087277 | 27087277 | PRJNA893346_P_NODE_24062_length_311_cov_1.294118_g23572_i0 | PRJNA893346 | 24062 | 311 | 1.294118 | 4.02470698 | Vibrio parahaemolyticus | 670 | Bacteria | Bacteria | 160 | 3.98e-49 | NR | MCQ6513366.1 | 670 | g23572 | i0 | 100 | 0.762057877813505 | 79 | 0 | 76.2 | 0 | 270 | 34 | 1 | 79 | MCQ6513366.1 hypothetical protein [Vibrio parahaemolyticus] | diamond | 237 | 160 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio parahaemolyticus | ||
| 27087283 | 27087283 | PRJNA893346_P_NODE_35362_length_248_cov_0.880000_g34872_i0 | PRJNA893346 | 35362 | 248 | 0.88 | 2.1824 | Solimonas sp. SE-A11 | 3054954 | Bacteria | Bacteria | 109 | 1.07e-26 | NR | WP_289275264.1 | 3054954 | g34872 | i0 | 94.4 | 1.30645161290323 | 54 | 3 | 65.3 | 0 | 246 | 85 | 125 | 178 | WP_289275264.1 endolytic transglycosylase MltG [Solimonas sp. SE-A11] | diamond | 324 | 109 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Nevskiales | Nevskiaceae | Solimonas | Solimonas sp. SE-A11 | ||
| 27189699 | 27189699 | PRJNA893346_P_NODE_38622_length_243_cov_0.905882_g38132_i0 | PRJNA893346 | 38622 | 243 | 0.905882 | 2.20129326 | Dongia | 1146845 | Bacteria | Bacteria | 69.3 | 3.45e-12 | NR | MDC0349042.1 | 1913988 | g38132 | i0 | 52.2 | 4.24691358024691 | 69 | 33 | 85.2 | 0 | 240 | 34 | 137 | 205 | MDC0349042.1 50S ribosomal protein L4 [Alphaproteobacteria bacterium] | diamond | 1032 | 69.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Alphaproteobacteria bacterium | |||||
| 27245229 | 27245229 | PRJNA893346_P_NODE_38343_length_243_cov_0.905882_g37853_i0 | PRJNA893346 | 38343 | 243 | 0.905882 | 2.20129326 | Escherichia coli | 562 | Bacteria | Bacteria | 53.1 | 3.68e-7 | NR | MFK9312080.1 | 562 | g37853 | i0 | 46.2 | 0.641975308641975 | 52 | 28 | 64.2 | 0 | 2 | 157 | 16 | 67 | MFK9312080.1 hypothetical protein [Escherichia coli] | diamond | 156 | 53.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 27276979 | 27276979 | PRJNA893346_P_NODE_19523_length_349_cov_1.108696_g19034_i0 | PRJNA893346 | 19523 | 349 | 1.108696 | 3.86934904 | Gammaproteobacteria bacterium | 1913989 | Bacteria | Bacteria | 43.9 | 0.0448 | NR | HAG73061.1 | 1913989 | g19034 | i0 | 28.6 | 0.782234957020057 | 91 | 59 | 78.2 | 1 | 58 | 330 | 265 | 349 | HAG73061.1 hypothetical protein [Gammaproteobacteria bacterium] | diamond | 273 | 43.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Gammaproteobacteria bacterium | |||||
| 27276992 | 27276992 | PRJNA893346_P_NODE_39343_length_242_cov_0.911243_g38853_i0 | PRJNA893346 | 39343 | 242 | 0.911243 | 2.20520806 | Rubellimicrobium mesophilum | 1123067 | Bacteria | Bacteria | 42.4 | 0.0496 | NR | WP_037278024.1 | 1123067 | g38853 | i0 | 37.5 | 0.892561983471074 | 72 | 43 | 89.3 | 1 | 20 | 235 | 250 | 319 | WP_037278024.1 ABC transporter permease [Rubellimicrobium mesophilum] | diamond | 216 | 42.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Roseobacteraceae | Rubellimicrobium | Rubellimicrobium mesophilum | ||
| 27340223 | 27340223 | PRJNA893346_P_NODE_37383_length_245_cov_0.895349_g36893_i0 | PRJNA893346 | 37383 | 245 | 0.895349 | 2.19360505 | Ideonella margarita | 2984191 | Bacteria | Bacteria | 165 | 7.64e-48 | NR | WP_341397423.1 | 2984191 | g36893 | i0 | 96.3 | 0.991836734693878 | 81 | 3 | 99.2 | 0 | 3 | 245 | 293 | 373 | WP_341397423.1 glycosyltransferase family 4 protein [Ideonella margarita] | diamond | 243 | 165 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Ideonella | Ideonella margarita | ||
| 27813989 | 27813989 | PRJNA893346_P_NODE_38924_length_242_cov_0.911243_g38434_i0 | PRJNA893346 | 38924 | 242 | 0.911243 | 2.20520806 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 58.5 | 6.69e-8 | NR | MBS0468441.1 | 1977087 | g38434 | i0 | 44.6 | 0.805785123966942 | 65 | 34 | 80.6 | 1 | 241 | 47 | 60 | 122 | MBS0468441.1 glutathione S-transferase family protein [Pseudomonadota bacterium] | diamond | 195 | 58.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 27940128 | 27940128 | PRJNA893346_P_NODE_35965_length_247_cov_0.885057_g35475_i0 | PRJNA893346 | 35965 | 247 | 0.885057 | 2.18609079 | Chromobacterium violaceum | 536 | Bacteria | Bacteria | 92.8 | 3.87e-21 | NR | VEB44235.1 | 536 | g35475 | i0 | 56.1 | 5.78137651821862 | 82 | 33 | 99.6 | 2 | 1 | 246 | 133 | 211 | VEB44235.1 Uncharacterised protein [Chromobacterium violaceum] | diamond | 1428 | 92.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chromobacteriaceae | Chromobacterium | Chromobacterium violaceum | ||
| 28003381 | 28003381 | PRJNA893346_P_NODE_39325_length_242_cov_0.911243_g38835_i0 | PRJNA893346 | 39325 | 242 | 0.911243 | 2.20520806 | Alphaproteobacteria bacterium | 1913988 | Bacteria | Bacteria | 43.5 | 0.0145 | NR | NWH07506.1 | 1913988 | g38835 | i0 | 43.5 | 0.570247933884298 | 46 | 25 | 55.8 | 1 | 202 | 68 | 47 | 92 | NWH07506.1 SCO family protein [Alphaproteobacteria bacterium] | diamond | 138 | 43.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Alphaproteobacteria bacterium | |||||
| 28042569 | 28042569 | PRJNA893346_P_NODE_26845_length_291_cov_1.412844_g26355_i0 | PRJNA893346 | 26845 | 291 | 1.412844 | 4.11137604 | Bacteria | 2 | Bacteria | Bacteria | 89.7 | 7.29e-19 | NR | WP_298186503.1 | 1874826 | g26355 | i0 | 57.5 | 4.01030927835052 | 73 | 31 | 75.3 | 0 | 33 | 251 | 267 | 339 | WP_298186503.1 SDR family oxidoreductase [Novosphingobium sp.] | diamond | 1167 | 89.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Novosphingobium | Novosphingobium sp. | ||
| 28421618 | 28421618 | PRJNA893346_P_NODE_39246_length_242_cov_0.911243_g38756_i0 | PRJNA893346 | 39246 | 242 | 0.911243 | 2.20520806 | Alphaproteobacteria | 28211 | Bacteria | Bacteria | 90.9 | 4.2e-19 | NR | MDG2186770.1 | 1909294 | g38756 | i0 | 62.5 | 7.53719008264463 | 64 | 24 | 79.3 | 0 | 234 | 43 | 597 | 660 | MDG2186770.1 2-oxoglutarate dehydrogenase E1 component [Hyphomicrobiales bacterium] | diamond | 1824 | 90.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Hyphomicrobiales bacterium | ||||
| 28445386 | 28445386 | PRJNA893346_P_NODE_38806_length_242_cov_1.390533_g38316_i0 | PRJNA893346 | 38806 | 242 | 1.390533 | 3.36508986 | Salmonella enterica | 28901 | Bacteria | Bacteria | 43.5 | 0.00419 | NR | MCY5962370.1 | 2583588 | g38316 | i0 | 95.2 | 0.260330578512397 | 21 | 1 | 26 | 0 | 8 | 70 | 1 | 21 | MCY5962370.1 hypothetical protein [Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-] | diamond | 63 | 43.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella enterica | ||
| 28476800 | 28476800 | PRJNA893346_P_NODE_28806_length_279_cov_1.150485_g28316_i0 | PRJNA893346 | 28806 | 279 | 1.150485 | 3.20985315 | unclassified Cupriavidus | 2640874 | Bacteria | Bacteria | 70.5 | 1.9e-13 | NR | WP_137926207.1 | 2640874 | g28316 | i0 | 49.3 | 4.78494623655914 | 71 | 30 | 76.3 | 1 | 217 | 5 | 3 | 67 | WP_137926207.1 MULTISPECIES: 4a-hydroxytetrahydrobiopterin dehydratase [unclassified Cupriavidus] | diamond | 1335 | 70.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | |||
| 28476807 | 28476807 | PRJNA893346_P_NODE_36066_length_247_cov_0.885057_g35576_i0 | PRJNA893346 | 36066 | 247 | 0.885057 | 2.18609079 | Parashewanella curva | 2338552 | Bacteria | Bacteria | 42.7 | 0.0403 | NR | WP_121838064.1 | 2338552 | g35576 | i0 | 32.9 | 0.959514170040486 | 79 | 47 | 96 | 1 | 244 | 8 | 10 | 82 | WP_121838064.1 ankyrin repeat domain-containing protein [Parashewanella curva] | diamond | 237 | 42.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Shewanellaceae | Parashewanella | Parashewanella curva | ||
| 28855500 | 28855500 | PRJNA893346_P_NODE_32388_length_256_cov_1.338798_g31898_i0 | PRJNA893346 | 32388 | 256 | 1.338798 | 3.42732288 | Cucumibacter marinus | 1121252 | Bacteria | Bacteria | 42.4 | 0.0419 | NR | WP_029042726.1 | 1121252 | g31898 | i0 | 40.7 | 0.6328125 | 54 | 23 | 52.7 | 1 | 251 | 117 | 4 | 57 | WP_029042726.1 NnrU family protein [Cucumibacter marinus] | diamond | 162 | 42.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Devosiaceae | Cucumibacter | Cucumibacter marinus | ||
| 28887144 | 28887144 | PRJNA893346_P_NODE_29848_length_272_cov_2.336683_g29358_i0 | PRJNA893346 | 29848 | 272 | 2.336683 | 6.35577776 | Albidovulum sp. | 1872424 | Bacteria | Bacteria | 43.5 | 0.00991 | NR | WP_301917713.1 | 1872424 | g29358 | i0 | 37.1 | 0.683823529411765 | 62 | 32 | 66.2 | 3 | 3 | 182 | 45 | 101 | WP_301917713.1 hypothetical protein [Albidovulum sp.] | diamond | 186 | 43.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Albidovulum | Albidovulum sp. | ||
| 29400182 | 29400182 | PRJNA893346_P_NODE_27489_length_287_cov_1.439252_g26999_i0 | PRJNA893346 | 27489 | 287 | 1.439252 | 4.13065324 | Hyphomicrobiales | 356 | Bacteria | Bacteria | 99.4 | 1.73e-24 | NR | WP_299811118.1 | 1936171 | g26999 | i0 | 57.3 | 7.50522648083624 | 89 | 31 | 93 | 1 | 13 | 279 | 2 | 83 | WP_299811118.1 glycine cleavage system protein GcvH [uncultured Roseibium sp.] | diamond | 2154 | 99.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Stappiaceae | Roseibium | uncultured Roseibium sp. | ||
| 29423799 | 29423799 | PRJNA893346_P_NODE_33349_length_251_cov_0.865169_g32859_i0 | PRJNA893346 | 33349 | 251 | 0.865169 | 2.17157419 | Aquabacterium sp. | 1872578 | Bacteria | Bacteria | 136 | 7.259999999999999e-38 | NR | MBT9609135.1 | 1872578 | g32859 | i0 | 83.3 | 2.80876494023904 | 78 | 13 | 93.2 | 0 | 234 | 1 | 27 | 104 | MBT9609135.1 type II/IV secretion system protein [Aquabacterium sp.] | diamond | 705 | 136 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Aquabacterium | Aquabacterium sp. | |||
| 29518640 | 29518640 | PRJNA893346_P_NODE_18150_length_363_cov_1.551724_g17661_i0 | PRJNA893346 | 18150 | 363 | 1.551724 | 5.63275812 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 84.7 | 1.67e-17 | NR | HNK43923.1 | 1977087 | g17661 | i0 | 44 | 1.80165289256198 | 109 | 55 | 86.8 | 3 | 316 | 2 | 33 | 139 | HNK43923.1 hypothetical protein [Pseudomonadota bacterium] | diamond | 654 | 84.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 29526587 | 29526587 | PRJNA893346_P_NODE_11930_length_454_cov_1.251969_g11445_i0 | PRJNA893346 | 11930 | 454 | 1.251969 | 5.68393926 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 53.5 | 4.98e-5 | NR | WP_072954376.1 | 687 | g11445 | i0 | 27.1 | 4.50660792951542 | 170 | 103 | 99.1 | 4 | 2 | 451 | 112 | 280 | WP_072954376.1 M35 family metallo-endopeptidase [Vibrio gazogenes] | diamond | 2046 | 53.9 | 0.992578849721707 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio gazogenes | ||
| 29739471 | 29739471 | PRJNA893346_P_NODE_39930_length_241_cov_0.916667_g39440_i0 | PRJNA893346 | 39930 | 241 | 0.916667 | 2.20916747 | Enterobacter cancerogenus | 69218 | Bacteria | Bacteria | 106 | 2.09e-25 | NR | WP_006176285.1 | 69218 | g39440 | i0 | 62.5 | 5.97510373443983 | 80 | 29 | 98.3 | 1 | 3 | 239 | 184 | 263 | WP_006176285.1 UDP-glucose 4-epimerase GalE [Enterobacter cancerogenus] | diamond | 1440 | 106 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacter | Enterobacter cancerogenus | ||
| 29866075 | 29866075 | PRJNA893346_P_NODE_34731_length_249_cov_0.875000_g34241_i0 | PRJNA893346 | 34731 | 249 | 0.875 | 2.17875 | Candidatus Thiodiazotropha sp. | 2847306 | Bacteria | Bacteria | 99 | 6.61e-22 | NR | MES9976207.1 | 2847306 | g34241 | i0 | 61.8 | 0.819277108433735 | 68 | 26 | 81.9 | 0 | 2 | 205 | 960 | 1027 | MES9976207.1 reverse transcriptase domain-containing protein [Candidatus Thiodiazotropha sp.] | diamond | 204 | 99 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Sedimenticolaceae | Candidatus Thiodiazotropha | Candidatus Thiodiazotropha sp. | ||
| 30157918 | 30157918 | PRJNA893346_P_NODE_27892_length_285_cov_1.089623_g27402_i0 | PRJNA893346 | 27892 | 285 | 1.089623 | 3.10542555 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 90.9 | 2.56e-19 | NR | WP_262965595.1 | 96941 | g27402 | i0 | 48.2 | 3.66315789473684 | 85 | 43 | 89.5 | 1 | 277 | 23 | 95 | 178 | WP_262965595.1 SAM-dependent methyltransferase [Methylobacter psychrophilus] | diamond | 1044 | 91.7 | 0.991275899672846 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Methylococcales | Methylococcaceae | Methylobacter | Methylobacter psychrophilus | ||
| 30181897 | 30181897 | PRJNA893346_P_NODE_31112_length_264_cov_1.581152_g30622_i0 | PRJNA893346 | 31112 | 264 | 1.581152 | 4.17424128 | uncultured Planktomarina sp. | 1538529 | Bacteria | Bacteria | 94.4 | 1.11e-20 | NR | WP_347818729.1 | 1538529 | g30622 | i0 | 54.8 | 7.65909090909091 | 73 | 33 | 83 | 0 | 220 | 2 | 3 | 75 | WP_347818729.1 saccharopine dehydrogenase [uncultured Planktomarina sp.] | diamond | 2022 | 94.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Planktomarina | uncultured Planktomarina sp. | ||
| 30221259 | 30221259 | PRJNA893346_P_NODE_34232_length_250_cov_0.870056_g33742_i0 | PRJNA893346 | 34232 | 250 | 0.870056 | 2.17514 | Sphingomonas | 13687 | Bacteria | Bacteria | 66.2 | 9.2e-12 | NR | WP_254686557.1 | 185950 | g33742 | i0 | 44.1 | 3.204 | 68 | 38 | 81.6 | 0 | 212 | 9 | 2 | 69 | WP_254686557.1 GFA family protein [Sphingomonas faeni] | diamond | 801 | 66.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas faeni | ||
| 30371967 | 30371967 | PRJNA893346_P_NODE_31672_length_260_cov_6.422460_g31182_i0 | PRJNA893346 | 31672 | 260 | 6.42246 | 16.698396 | Escherichia coli | 562 | Bacteria | Bacteria | 70.9 | 5.1e-14 | NR | WP_353960142.1 | 562 | g31182 | i0 | 52.3 | 0.75 | 65 | 31 | 75 | 0 | 60 | 254 | 6 | 70 | WP_353960142.1 serine protease inhibitor [Escherichia coli] | diamond | 195 | 70.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30497996 | 30497996 | PRJNA893346_P_NODE_33913_length_250_cov_0.870056_g33423_i0 | PRJNA893346 | 33913 | 250 | 0.870056 | 2.17514 | Legionella lytica | 96232 | Bacteria | Bacteria | 118 | 6.94e-30 | NR | WP_252582623.1 | 96232 | g33423 | i0 | 64.6 | 4.932 | 82 | 29 | 98.4 | 0 | 246 | 1 | 172 | 253 | WP_252582623.1 class I SAM-dependent methyltransferase [Legionella lytica] | diamond | 1233 | 118 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Legionellales | Legionellaceae | Legionella | Legionella lytica | ||
| 30600400 | 30600400 | PRJNA893346_P_NODE_31433_length_262_cov_1.253968_g30943_i0 | PRJNA893346 | 31433 | 262 | 1.253968 | 3.28539616 | Pseudomonadota | 1224 | Bacteria | Bacteria | 87.8 | 3.76e-18 | NR | MBI09761.1 | 1898112 | g30943 | i0 | 54.1 | 7.52290076335878 | 85 | 36 | 97.3 | 1 | 6 | 260 | 113 | 194 | MBI09761.1 fatty acid desaturase [Rhodospirillaceae bacterium] | diamond | 1971 | 88.6 | 0.99097065462754 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Rhodospirillaceae | Rhodospirillaceae bacterium | |||
| 30908812 | 30908812 | PRJNA893346_P_NODE_37094_length_245_cov_0.895349_g36604_i0 | PRJNA893346 | 37094 | 245 | 0.895349 | 2.19360505 | Sphingomonas sp. | 28214 | Bacteria | Bacteria | 61.6 | 8.33e-9 | NR | NUR45631.1 | 28214 | g36604 | i0 | 44.4 | 0.771428571428571 | 63 | 34 | 75.9 | 1 | 195 | 10 | 148 | 210 | NUR45631.1 FAD-dependent oxidoreductase [Sphingomonas sp.] | diamond | 189 | 61.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. | ||
| 31003524 | 31003524 | PRJNA893346_P_NODE_28154_length_283_cov_1.466667_g27664_i0 | PRJNA893346 | 28154 | 283 | 1.466667 | 4.15066761 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 96.3 | 5.57e-22 | NR | MEM1371769.1 | 1977087 | g27664 | i0 | 65.3 | 2.26855123674912 | 72 | 25 | 76.3 | 0 | 67 | 282 | 38 | 109 | MEM1371769.1 electron transfer flavoprotein subunit beta/FixA family protein [Pseudomonadota bacterium] | diamond | 642 | 96.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 31319500 | 31319500 | PRJNA893346_P_NODE_31915_length_259_cov_1.241935_g31425_i0 | PRJNA893346 | 31915 | 259 | 1.241935 | 3.21661165 | Beijerinckiaceae bacterium | 1978229 | Bacteria | Bacteria | 45.1 | 0.00639 | NR | HWG05192.1 | 1978229 | g31425 | i0 | 38.6 | 0.810810810810811 | 70 | 41 | 81.1 | 1 | 6 | 215 | 101 | 168 | HWG05192.1 2-oxoglutarate and iron-dependent oxygenase domain-containing protein [Beijerinckiaceae bacterium] | diamond | 210 | 45.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Beijerinckiaceae | Beijerinckiaceae bacterium | |||
| 31635774 | 31635774 | PRJNA893346_P_NODE_6936_length_610_cov_2.284916_g6465_i0 | PRJNA893346 | 6936 | 610 | 2.284916 | 13.9379876 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 56.2 | 1.4e-6 | NR | MBP9838656.1 | 1977087 | g6465 | i0 | 33.7 | 0.49672131147541 | 101 | 67 | 49.7 | 0 | 292 | 594 | 1 | 101 | MBP9838656.1 YeeE/YedE family protein [Pseudomonadota bacterium] | diamond | 303 | 56.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 31667372 | 31667372 | PRJNA893346_P_NODE_12637_length_440_cov_1.179837_g12151_i0 | PRJNA893346 | 12637 | 440 | 1.179837 | 5.1912828 | Thiobacillus sp. | 924 | Bacteria | Bacteria | 52.4 | 9.64e-5 | NR | NTV94021.1 | 924 | g12151 | i0 | 63.6 | 1.58863636363636 | 33 | 12 | 22.5 | 0 | 340 | 438 | 2 | 34 | NTV94021.1 F0F1 ATP synthase subunit beta [Thiobacillus sp.] | diamond | 699 | 52.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Thiobacillaceae | Thiobacillus | Thiobacillus sp. | ||
| 31762290 | 31762290 | PRJNA893346_P_NODE_10997_length_473_cov_1.807500_g10513_i0 | PRJNA893346 | 10997 | 473 | 1.8075 | 8.549475 | Gammaproteobacteria bacterium | 1913989 | Bacteria | Bacteria | 67.8 | 1.48e-10 | NR | MDH5619531.1 | 1913989 | g10513 | i0 | 33.1 | 1.82663847780127 | 145 | 86 | 85 | 2 | 411 | 10 | 12 | 156 | MDH5619531.1 heme-binding protein [Gammaproteobacteria bacterium] | diamond | 864 | 67.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Gammaproteobacteria bacterium | |||||
| 31857155 | 31857155 | PRJNA893346_P_NODE_30597_length_268_cov_1.153846_g30107_i0 | PRJNA893346 | 30597 | 268 | 1.153846 | 3.09230728 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 66.6 | 2.02e-10 | NR | MEW5903007.1 | 1977087 | g30107 | i0 | 43.7 | 1.97014925373134 | 87 | 49 | 97.4 | 0 | 267 | 7 | 360 | 446 | MEW5903007.1 aminomethyl-transferring glycine dehydrogenase [Pseudomonadota bacterium] | diamond | 528 | 66.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 31857156 | 31857156 | PRJNA893346_P_NODE_32237_length_257_cov_1.298913_g31747_i0 | PRJNA893346 | 32237 | 257 | 1.298913 | 3.33820641 | Thalassotalea euphylliae | 1655234 | Bacteria | Bacteria | 88.6 | 2.99e-18 | NR | WP_116002159.1 | 1655234 | g31747 | i0 | 56.1 | 0.770428015564202 | 66 | 29 | 77 | 0 | 201 | 4 | 136 | 201 | WP_116002159.1 PAS domain-containing sensor histidine kinase [Thalassotalea euphylliae] | diamond | 198 | 88.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Colwelliaceae | Thalassotalea | Thalassotalea euphylliae | ||
| 32015442 | 32015442 | PRJNA893346_P_NODE_35198_length_248_cov_0.880000_g34708_i0 | PRJNA893346 | 35198 | 248 | 0.88 | 2.1824 | Acidithiobacillus ferrivorans | 160808 | Bacteria | Bacteria | 42.7 | 0.0393 | NR | WP_215895020.1 | 160808 | g34708 | i0 | 35.3 | 0.82258064516129 | 68 | 42 | 79.8 | 1 | 33 | 230 | 173 | 240 | WP_215895020.1 zincin-like metallopeptidase domain-containing protein [Acidithiobacillus ferrivorans] | diamond | 204 | 42.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Acidithiobacillia | Acidithiobacillales | Acidithiobacillaceae | Acidithiobacillus | Acidithiobacillus ferrivorans | ||
| 32023288 | 32023288 | PRJNA893346_P_NODE_35918_length_247_cov_0.885057_g35428_i0 | PRJNA893346 | 35918 | 247 | 0.885057 | 2.18609079 | Jannaschia | 188905 | Bacteria | Bacteria | 75.9 | 8.24e-14 | NR | WP_179380951.1 | 2741674 | g35428 | i0 | 48.8 | 2.91497975708502 | 82 | 42 | 99.6 | 0 | 247 | 2 | 329 | 410 | WP_179380951.1 allantoinase PuuE [Jannaschia marina] | diamond | 720 | 76.6 | 0.990861618798956 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Roseobacteraceae | Jannaschia | Jannaschia marina | ||
| 32173893 | 32173893 | PRJNA893346_P_NODE_38538_length_243_cov_0.905882_g38048_i0 | PRJNA893346 | 38538 | 243 | 0.905882 | 2.20129326 | Cellvibrio sp. KY-GH-1 | 2303332 | Bacteria | Bacteria | 131 | 4.6799999999999996e-34 | NR | WP_151030603.1 | 2303332 | g38048 | i0 | 77.8 | 1 | 81 | 18 | 100 | 0 | 243 | 1 | 110 | 190 | WP_151030603.1 hypothetical protein [Cellvibrio sp. KY-GH-1] | diamond | 243 | 131 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Cellvibrionales | Cellvibrionaceae | Cellvibrio | Cellvibrio sp. KY-GH-1 | ||
| 32205352 | 32205352 | PRJNA893346_P_NODE_32298_length_257_cov_1.130435_g31808_i0 | PRJNA893346 | 32298 | 257 | 1.130435 | 2.90521795 | Xanthobacteraceae bacterium | 2021379 | Bacteria | Bacteria | 92.8 | 8.290000000000001e-21 | NR | HEY4856536.1 | 2021379 | g31808 | i0 | 53.9 | 7.0272373540856 | 76 | 35 | 88.7 | 0 | 230 | 3 | 38 | 113 | HEY4856536.1 50S ribosomal protein L3 [Xanthobacteraceae bacterium] | diamond | 1806 | 92.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Xanthobacteraceae | Xanthobacteraceae bacterium | |||
| 32300588 | 32300588 | PRJNA893346_P_NODE_6919_length_611_cov_1.843866_g6448_i0 | PRJNA893346 | 6919 | 611 | 1.843866 | 11.26602126 | Thalassocella blandensis | 2584524 | Bacteria | Bacteria | 80.1 | 1.33e-13 | NR | VUD68753.1 | 2584524 | g6448 | i0 | 34.2 | 1.61538461538462 | 158 | 96 | 75.1 | 5 | 129 | 587 | 164 | 318 | VUD68753.1 hypothetical protein TDB9533_04112 [Thalassocella blandensis] | diamond | 987 | 80.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Cellvibrionales | Cellvibrionaceae | Thalassocella | Thalassocella blandensis | ||
| 32426821 | 32426821 | PRJNA893346_P_NODE_10279_length_491_cov_1.325359_g9795_i0 | PRJNA893346 | 10279 | 491 | 1.325359 | 6.50751269 | Isoalcanivorax indicus | 2202653 | Bacteria | Bacteria | 211 | 1.82e-66 | NR | WP_111657200.1 | 2202653 | g9795 | i0 | 60.6 | 1.95519348268839 | 160 | 62 | 97.1 | 1 | 478 | 2 | 1 | 160 | WP_111657200.1 superoxide dismutase [Isoalcanivorax indicus] | diamond | 960 | 211 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | Alcanivoracaceae | Isoalcanivorax | Isoalcanivorax indicus | ||
| 32426828 | 32426828 | PRJNA893346_P_NODE_26579_length_293_cov_1.395455_g26089_i0 | PRJNA893346 | 26579 | 293 | 1.395455 | 4.08868315 | Albidovulum marisflavi | 2984159 | Bacteria | Bacteria | 157 | 1.62e-44 | NR | WP_263733865.1 | 2984159 | g26089 | i0 | 78.4 | 2.97952218430034 | 97 | 21 | 99.3 | 0 | 292 | 2 | 47 | 143 | WP_263733865.1 type III PLP-dependent enzyme [Albidovulum marisflavi] | diamond | 873 | 157 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Albidovulum | Albidovulum marisflavi | ||
| 32718627 | 32718627 | PRJNA893346_P_NODE_22800_length_321_cov_1.258065_g22310_i0 | PRJNA893346 | 22800 | 321 | 1.258065 | 4.03838865 | Bacteria | 2 | Bacteria | Bacteria | 57 | 9.14e-7 | NR | WP_084623201.1 | 50715 | g22310 | i0 | 36.3 | 1.75700934579439 | 102 | 64 | 94.4 | 1 | 308 | 6 | 672 | 773 | WP_084623201.1 fibronectin type III domain-containing protein [Acidisphaera rubrifaciens] | diamond | 564 | 57.4 | 0.993031358885017 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Acetobacterales | Acetobacteraceae | Acidisphaera | Acidisphaera rubrifaciens | ||
| 32718633 | 32718633 | PRJNA893346_P_NODE_35280_length_248_cov_0.880000_g34790_i0 | PRJNA893346 | 35280 | 248 | 0.88 | 2.1824 | Bacteria | 2 | Bacteria | Bacteria | 70.9 | 2.65e-12 | NR | WP_023454403.1 | 1282360 | g34790 | i0 | 54.3 | 4.76612903225806 | 70 | 29 | 81 | 1 | 201 | 1 | 164 | 233 | WP_023454403.1 SPFH domain-containing protein [Asticcacaulis sp. AC460] | diamond | 1182 | 70.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Asticcacaulis | Asticcacaulis sp. AC460 | ||
| 32805261 | 32805261 | PRJNA893346_P_NODE_37320_length_245_cov_0.895349_g36830_i0 | PRJNA893346 | 37320 | 245 | 0.895349 | 2.19360505 | Parasedimentitalea maritima | 2578117 | Bacteria | Bacteria | 72.8 | 6.13e-14 | NR | WP_245227324.1 | 2578117 | g36830 | i0 | 71.4 | 2.71836734693878 | 42 | 12 | 51.4 | 0 | 140 | 15 | 115 | 156 | WP_245227324.1 hypothetical protein, partial [Parasedimentitalea maritima] | diamond | 666 | 72.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Parasedimentitalea | Parasedimentitalea maritima | ||
| 32844481 | 32844481 | PRJNA893346_P_NODE_29280_length_276_cov_1.394089_g28790_i0 | PRJNA893346 | 29280 | 276 | 1.394089 | 3.84768564 | Alphaproteobacteria | 28211 | Bacteria | Bacteria | 107 | 7.64e-26 | NR | MAJ64096.1 | 1913988 | g28790 | i0 | 65.6 | 14.6521739130435 | 90 | 27 | 97.8 | 2 | 272 | 3 | 16 | 101 | MAJ64096.1 elongation factor Ts [Alphaproteobacteria bacterium] | diamond | 4044 | 107 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Alphaproteobacteria bacterium | |||||
| 32899633 | 32899633 | PRJNA893346_P_NODE_38260_length_243_cov_0.905882_g37770_i0 | PRJNA893346 | 38260 | 243 | 0.905882 | 2.20129326 | Burkholderiaceae bacterium | 2030806 | Bacteria | Bacteria | 41.2 | 0.0406 | NR | MBV8636113.1 | 2030806 | g37770 | i0 | 42 | 0.617283950617284 | 50 | 29 | 61.7 | 0 | 17 | 166 | 35 | 84 | MBV8636113.1 cobyrinic acid ac-diamide synthase [Burkholderiaceae bacterium] | diamond | 150 | 41.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;