RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA893346" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA893346 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8521385 8521385 PRJNA893346_P_NODE_5847_length_668_cov_10.126050_g5383_i0 PRJNA893346 5847 668 10.12605 67.642014 Botoulivirus sp. 2809208 Viruses Viruses 164 5.6699999999999984e-43   NR UJQ92024.1 2809208 g5383 i0 49.2 0.82185628742515 183 88 80.4 3 613 77 10 191 UJQ92024.1 MAG: putative RNA-dependent RNA polymerase [Botoulivirus sp.] diamond 549 164 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Botoulivirus Botoulivirus sp.
14896008 14896008 PRJNA893346_P_NODE_192_length_2637_cov_27.388456_g152_i0 PRJNA893346 192 2637 27.388456 722.23358472 Fusarium pseudograminearum mitovirus 5 3234080 Viruses Viruses 697 3.5099999999999993e-239   NR XCX09775.1 3234080 g152 i0 52.8 0.798634812286689 702 303 79.6 5 2270 171 2 677 XCX09775.1 RNA-dependent RNA polymerase [Fusarium pseudograminearum mitovirus 5] diamond 2106 697 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Fusarium pseudograminearum mitovirus 5
26707116 26707116 PRJNA893346_P_NODE_1721_length_1234_cov_10.915590_g1462_i0 PRJNA893346 1721 1234 10.91559 134.6983806 Botoulivirus sp. 2809208 Viruses Viruses 251 6.370000000000001e-73   NR UJQ92024.1 2809208 g1462 i0 49 0.624797406807131 257 124 61.3 3 1232 477 371 625 UJQ92024.1 MAG: putative RNA-dependent RNA polymerase [Botoulivirus sp.] diamond 771 251 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Botoulivirus Botoulivirus sp.
31517263 31517263 PRJNA893346_P_NODE_8416_length_546_cov_35.158562_g7934_i0 PRJNA893346 8416 546 35.158562 191.96574852 Botoulivirus 2560105 Viruses Viruses 229 6.2e-68   NR YP_010800251.1 2686527 g7934 i0 62.8 3.93406593406593 180 67 98.9 0 5 544 204 383 YP_010800251.1 RNA dependent RNA polymerase [Plasmopara viticola lesion associated ourmia-like virus 56] diamond 2148 229 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Botoulivirus Botoulivirus betaplasmoparae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;