RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA891846" and tax_clade = "Discoba"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA891846 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30118647 30118647 PRJNA891846_P_NODE_30012_length_279_cov_1.660194_g29793_i0 PRJNA891846 30012 279 1.660194 4.63194126 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 47 0.0018   NR XP_028884862.1 67003 g29793 i0 35.2 0.978494623655914 91 51 89.2 3 249 1 10 100 XP_028884862.1 small glutamine-rich tetratricopeptide repeat protein [Trypanosoma theileri] diamond 273 47 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
30908788 30908788 PRJNA891846_P_NODE_31414_length_273_cov_1.390000_g31195_i0 PRJNA891846 31414 273 1.39 3.7947 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 136 7.3e-35   NR KAJ9448183.1 91374 g31195 i0 84.7 1.91208791208791 85 13 93.4 0 18 272 244 328 KAJ9448183.1 Kinesin-like protein unc-104 [Diplonema papillatum] diamond 522 136 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;