RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA889065" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA889065 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26643837 26643837 PRJNA889065_S_NODE_27581_length_184_cov_2.609929_g27343_i0 PRJNA889065 27581 184 2.609929 4.80226936 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 66.6 4.84e-12   NR MEM3955981.1 3045160 g27343 i0 56.1 3.79891304347826 57 25 92.9 0 179 9 50 106 MEM3955981.1 50S ribosomal protein L24 [Candidatus Bathyarchaeia archaeon] diamond 699 66.6 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
29203065 29203065 PRJNA889065_S_NODE_9529_length_309_cov_2.345865_g9291_i0 PRJNA889065 9529 309 2.345865 7.24872285 Desulfurococcaceae archaeon 2184738 Archaea Archaea 43.1 0.0239   NR MEZ0394169.1 2184738 g9291 i0 27.5 0.883495145631068 91 62 84.5 1 275 15 33 123 MEZ0394169.1 hypothetical protein [Desulfurococcaceae archaeon] diamond 273 43.1 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae   Desulfurococcaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;