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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA888821" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA888821 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28413602 28413602 PRJNA888821_P_NODE_1866_length_450_cov_18.965517_g1791_i0 PRJNA888821 1866 450 18.965517 85.3448265 Physella acuta 109671 Mollusca Mollusca 45.4 0.0305   NR XP_059141798.1 109671 g1791 i0 33.3 0.62 93 59 62 1 122 400 174 263 XP_059141798.1 heparan sulfate glucosamine 3-O-sulfotransferase 1-like [Physella acuta] diamond 279 45.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
29139963 29139963 PRJNA888821_P_NODE_34709_length_251_cov_0.865169_g34626_i0 PRJNA888821 34709 251 0.865169 2.17157419 Elysia chlorotica 188477 Mollusca Mollusca 94 3.9e-20   NR RUS72307.1 188477 g34626 i0 65.2 11.8326693227092 66 23 78.9 0 220 23 176 241 RUS72307.1 hypothetical protein EGW08_019930 [Elysia chlorotica] diamond 2970 94 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia chlorotica
30624019 30624019 PRJNA888821_P_NODE_1493_length_484_cov_12.282238_g1418_i0 PRJNA888821 1493 484 12.282238 59.44603192 Mytilus coruscus 42192 Mollusca Mollusca 63.2 3.65e-8   NR CAC5390415.1 42192 g1418 i0 49.1 0.353305785123967 57 29 35.3 0 272 442 9 65 CAC5390415.1 unnamed protein product [Mytilus coruscus] diamond 171 63.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus coruscus
31074482 31074482 PRJNA888821_P_NODE_16475_length_310_cov_5.535865_g16393_i0 PRJNA888821 16475 310 5.535865 17.1611815 Mytilus 6548 Mollusca Mollusca 79.7 6.24e-16   NR CAG2185356.1 6550 g16393 i0 40.4 3.93870967741935 104 55 99.7 3 309 1 58 155 CAG2185356.1 unnamed protein product [Mytilus edulis] diamond 1221 79.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
31643416 31643416 PRJNA888821_P_NODE_34776_length_251_cov_0.865169_g34693_i0 PRJNA888821 34776 251 0.865169 2.17157419 root 1 Root_unresolved Root_unresolved 101 6.88e-25   NR XP_052072593.1 6549 g34693 i0 74.6 64.8645418326693 67 17 80.1 0 249 49 105 171 XP_052072593.1 60S ribosomal protein L23a-like [Mytilus californianus] diamond 16281 102 0.990196078431373 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
32584979 32584979 PRJNA888821_P_NODE_4499_length_343_cov_9.714815_g4417_i0 PRJNA888821 4499 343 9.714815 33.32181545 Mytilus coruscus 42192 Mollusca Mollusca 53.5 1.2e-5   NR CAC5426311.1 42192 g4417 i0 46.9 0.428571428571429 49 26 42.9 0 149 3 151 199 CAC5426311.1 unnamed protein product [Mytilus coruscus] diamond 147 53.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus coruscus
32616283 32616283 PRJNA888821_P_NODE_52240_length_199_cov_15.166667_g52157_i0 PRJNA888821 52240 199 15.166667 30.18166733 Gigantopelta aegis 1735272 Mollusca Mollusca 61.2 6.3e-9   NR XP_041361847.1 1735272 g52157 i0 45.2 5.5929648241206 62 34 93.5 0 195 10 474 535 XP_041361847.1 uncharacterized protein LOC121377814 [Gigantopelta aegis] diamond 1113 61.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;